Pelagibacterium halotolerans: KKY_1335
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Entry
KKY_1335 CDS
T01645
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03030
DNA replication
phl03430
Mismatch repair
phl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKY_1335
03430 Mismatch repair
KKY_1335
03440 Homologous recombination
KKY_1335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phl03032
]
KKY_1335
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_1335
Enzymes [BR:
phl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKY_1335
DNA replication proteins [BR:
phl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KKY_1335
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KKY_1335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
ParBc_C
DUF655
HHH_3
HHH
McdB_C
Motif
Other DBs
NCBI-ProteinID:
AEQ51357
UniProt:
G4R879
LinkDB
All DBs
Position
1307069..1310512
Genome browser
AA seq
1147 aa
AA seq
DB search
MSGPGFVHLHVHSAFSLLEGALPLGTILEMAKADGQPAIGIADTNNLFGALEFSEKASGK
GIQPIIGCELALDFGADADKPSDRVNLGKGSVVLIAADAVGFANLAELVSRAYQEGCDGR
TAIHIDWLVDNALGLLCLTGGPEGAIDPYLAAGLDAQAQSRLSVLHRIFGDRLYVEIQRH
DRALENAVEPRLIDLAYTLDLPLVATNEPYFPRQEDYDSHDALLAIAAGSVVAQTERRRL
SDQHYFKTRQEMITLFSDLPEALENTVEIAQRCSYRPHTHDPILPKFAAADGVGEEEAVA
AEGEELARQAREGLRMRLADYGHAPDRTTQEYEERLEFEIKVIRDMKFPGYFLIVADFIK
WAKAHNIPVGPGRGSGAGSLVAYALTITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQE
RREEVIRYVQDKYGYEQVAQIITFGTLQPRAALRDVGRVLQMPYGQVDRICKLVPNNPAN
PVTLAQAINDEPRLQMMRDEDETVAELLRIAGKLEGLFRHASTHAAGIVIGDRPLQKLLP
LYRDPRSDMPVTQYNLKWVEPAGLVKFDFLGLKTLTTIRYAVEMVKETGVDLDIDAIPLE
DAPTYKLYADGDTYGIFQFESPGMRRALVELKPDRIEDLIAMNALYRPGPMDNIPSFINR
KHGREDVEYPHETLAAVLDETYGIIVYQEQVMQIAQLLSGYSLGEADMLRRAMGKKIKAE
MDKQRVRFQEGAIRNGIKKGQADTIFDLLAKFANYGFNKSHAAAYAWVSYQTAYLKTHYP
EQFYAASMTLDMAQTDKLSDFRREAQKKGIEVVPPCINRSEVNFSVRDGRILYSLCAVKG
VGRNVAEHIVEIRGDRPFKDLADFASRIDPKIINKRTLETLINAGAFDQLNKRREQLVEV
IDTIVNTAQRETSGRADGIVDMFASSQPQAITPPEHVAPWSLTERLAREHAAIGFYLSAH
PLDDYTELFEKLRVQQWAGFERAARNGAVAGRLAGTLISRQDRRTRKGSTMAIMMFSDPS
GSFECIAFSEQINDFGRWLEPGKSIVLEVGADSRPDGVRLRLINCEPIDASVEKLGRRMT
IFAGNERCLAPIKSQLQPGGEGVVSLVLVRDEGEREYEIELPGQFRLTPQLAGGLKAITG
VVDVRLN
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccggtttcgtccatcttcacgtccattcggctttctccctgcttgagggt
gctctaccgcttggcacaattctcgagatggccaaggcagatggacagcccgctatcggt
attgccgacaccaacaatctgttcggcgcgctagagttttccgagaaggcgtcgggcaag
ggcatccaaccaattattggttgcgaactggccctcgattttggcgccgatgccgacaag
ccatcggaccgtgtcaatctaggcaagggatcggtcgttttgatcgccgccgatgctgtc
gggttcgcaaatctggccgaactcgtctctcgggcctatcaggaaggctgcgatgggcgg
acggcaatccacatcgactggttggtcgataacgcactcggtctgctctgcctgacgggt
gggcccgaaggggctatcgacccctaccttgctgccgggctcgacgcccaggcccagtcg
cgactgtcggttctccatcgtatattcggcgacagactttatgtggagatccagcgccac
gatagggcgctggaaaacgccgtcgaaccgcgcctgatcgatcttgcctataccctcgat
ttgccgcttgtggccacaaacgaaccctacttccccaggcaggaggattacgattcccat
gacgccctgctggccatcgccgccggctcggtcgtagcgcaaaccgagcgtcgccggttg
tccgaccagcactatttcaagacacggcaggaaatgatcacgctcttttccgacctgccc
gaggccttggagaacaccgtcgaaattgcccagcgctgcagctatcgcccgcatacgcac
gaccccattcttcccaaattcgccgcggcggatggggtgggtgaggaggaagctgtggcc
gccgaaggcgaggaactggcccggcaggcacgcgaggggttaaggatgcgcctggccgac
tacggccacgctcccgaccgcaccacccaggagtatgaagagcggctcgaattcgaaatc
aaggtgatccgggacatgaagttccccggctatttccttattgttgccgactttattaag
tgggccaaagcccacaatattcccgtcggcccgggccgcgggtcgggtgcgggctcactg
gtggcctatgcgctgaccatcacggacctcgatccgctgcgttacaatctgctcttcgag
cgcttcctcaatcctgaacgcgtatcgatgccggactttgacatcgatttctgccaggag
cgccgcgaagaggtcatccgctacgttcaggacaaatacggctacgagcaggtcgcccag
attatcaccttcggaacgctgcagccgcgcgccgcgttgcgcgacgtgggccgcgtgctc
cagatgccctacgggcaggttgatcgcatttgcaagctggtccccaacaatcccgccaat
cccgtgacgctggcccaggcgatcaatgacgagccgcgcctgcagatgatgcgcgacgag
gacgagaccgtcgccgaactgctgcgcatcgccggcaagctcgaaggtctgttccggcac
gcctcgacccatgccgccggtatcgtgatcggcgaccgcccgctgcaaaagctgctgccg
ctttatcgcgatccgcgctcggacatgccggtcacccagtacaacctcaaatgggtcgaa
ccggcgggcctcgtaaagttcgactttctcgggctgaagacgctgaccacgatccggtat
gccgtcgaaatggtgaaggaaaccggcgtcgacctcgatatcgacgccatcccgctcgag
gatgcgcccacctacaagctctacgccgatggcgacacctacggcatcttccagtttgaa
agtcccggaatgcgccgcgctcttgtggagctcaagccggaccgtatcgaagacctgatc
gccatgaacgcgctctatcggcccggtccgatggataacattcccagcttcatcaaccgc
aagcatggccgcgaagacgtggaatacccacacgagacgctcgccgccgtccttgatgag
acctacggcatcattgtttaccaggaacaggtgatgcagatcgcccagttgctgtcgggc
tattcgctgggcgaggccgacatgctgcgccgcgccatgggcaagaagatcaaggcggag
atggacaagcagcgtgtccgtttccaggaaggcgccatccgcaacggcatcaagaagggc
caggccgatacgatcttcgacctgctcgccaagttcgccaattacggcttcaacaagagc
cacgccgccgcttacgcctgggtctcctaccagacggcttatctcaagacccattatccc
gagcagttctatgcagcgtccatgacgctcgacatggcgcagaccgataaattgtccgat
ttccgccgcgaggcgcagaaaaagggcatcgaagttgttcctccgtgcatcaatcgctcg
gaagtcaatttctcggtgcgtgatggccgcattctttattcgctctgcgccgtaaagggc
gtgggccgcaacgtcgccgaacacatcgtcgagatacgcggtgaccgtcccttcaaggac
ctcgccgatttcgcctcccgtatcgatcccaagatcatcaacaagcggacgttggaaacc
ctcatcaacgcgggcgcctttgaccagctcaacaagcgccgtgagcagttggtcgaggtc
atcgataccatagtcaacaccgcccagcgcgaaaccagcggtcgggccgatggcattgtg
gatatgtttgcgtccagccagccccaggccattacgccacccgaacatgttgcgccctgg
agcctgaccgaacgcttggcccgcgaacacgcggccatcggcttttacctttccgcccac
ccgctcgatgactacaccgaactgttcgagaaacttcgtgtccagcaatgggccggcttc
gagcgtgcggcgcgaaacggcgccgtggcagggcgtcttgccggcacgctgatctcgcgt
caggatcgtcgcacccggaagggttcgacaatggccatcatgatgttttctgatcccagc
ggatcgttcgagtgcatcgccttttccgagcagattaacgacttcgggcgctggctcgag
cccggaaaatccatagtcctcgaagtgggcgccgattcccgccccgacggggtcaggcta
cggcttatcaattgcgagcccatcgacgcctcggtcgaaaagcttggccgccgcatgacg
atctttgccggcaacgagagatgcctcgctccaatcaagtcccagcttcaaccgggcggg
gaaggggtggtcagcctcgttctggtccgcgacgagggcgaacgcgaatatgaaatcgag
ttgcccggccagtttcgtctcacgccacaactggctggcgggctcaaggccattaccggc
gtggtcgatgtgcgcttgaactga
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