Pelagibacterium halotolerans: KKY_1736
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Entry
KKY_1736 CDS
T01645
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phl03032
]
KKY_1736
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_1736
Enzymes [BR:
phl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KKY_1736
DNA replication proteins [BR:
phl03032
]
Prokaryotic type
DNA Topoisomerases
KKY_1736
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KKY_1736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEQ51751
UniProt:
G4RCU6
LinkDB
All DBs
Position
complement(1727803..1728840)
Genome browser
AA seq
345 aa
AA seq
DB search
MAAIDPGLAAGRLRYVNDDEPGIFRRARGKGFSYVRASGRPVKRAGDVARIRALAIPPAW
SDVWICQDSNGHIQATGRDEKGRKQYRYHDQWHADRGRAKYALLAEFSANLAKLRKVVEA
DLRARGLPREKVVASVVWLMDHTMIRVGNDTYARDNKSFGLTTLRSRHIEISGATLRFRF
KGKSGREWDIGLSDRRMARVLRAIEHLPGQRLFRYRDDDGMRDIASHDVNEYIRGVLGER
SSSKDFRTWGGTVRALTLLSATEVPETRNGRARALNAVIDTVSRYLGNTRAVCRACYIHP
AVVERWERGTLAKDIAEIRAKRPRRSGLDSQECLVAVWLEKFAGR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatcgatcccgggcttgcggccgggcgcctgcgttatgtcaatgatgacgag
ccgggtattttccggcgggcaagaggcaaaggattttcttatgtccgggccagtggccga
ccggtgaaacgcgccggcgatgtcgcccgcatacgagctctggcgatcccgccggcgtgg
tccgacgtttggatatgccaggattccaacggacatattcaggcgaccggtcgcgacgag
aaaggacgcaagcaataccgatatcacgaccaatggcatgccgatcgcggcagagccaaa
tacgcgcttttggcagaattttccgccaaccttgccaagctgcgcaaagtcgttgaagcg
gacttgcgggcgcgtgggctgccgcgtgaaaaggtggtcgccagcgtggtctggctgatg
gatcacacgatgatccgcgtcggcaatgacacctacgcacgggacaacaagagtttcggg
ctaacgaccctccgctcgcggcatatcgagatttcgggtgcgacacttcggttccggttc
aagggcaagtcggggagagaatgggatatcggcctttcagatcgtcgtatggcccgggtc
ttaagagcaatcgagcatctgccgggccagaggctgttccgatatcgcgatgacgacggc
atgcgcgacatcgcgtcgcatgacgtcaacgaatatatccggggcgtcttaggcgagcgg
tccagctcaaaggactttcggacttggggtggcacggtacgcgcgctgacgctcctttcg
gccacggaggttccagagacgcgcaacggcagggccagggcgctcaatgccgtcatcgac
acggtgtcgagatatctgggcaatacgcgagccgtttgtcgcgcgtgctatattcacccg
gcggtcgttgaacgctgggagcgcggaacactcgcgaaagatattgcggaaatccgcgcg
aaacgcccacgcaggtcgggactggacagccaggaatgtttggtcgcggtttggctggaa
aagttcgccgggcgttag
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