Pelagibacterium halotolerans: KKY_2201
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Entry
KKY_2201 CDS
T01645
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKY_2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phl03019
]
KKY_2201
Enzymes [BR:
phl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KKY_2201
Messenger RNA biogenesis [BR:
phl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KKY_2201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
tRNA_NucTran2_2
GATase_6
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEQ52210
UniProt:
G4R6P8
LinkDB
All DBs
Position
complement(2179276..2180478)
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AA seq
400 aa
AA seq
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MDRDTALERLRHAPWLEAARPFFACLDGAEGRTRAVGGIVRDTLVGIANRQSDIDMASEL
LPDQVAQRARAAGMNVHPTGVDHGTITLVHNGRIAEVTTLRRDVETFGRKAKVSFGTDWI
EDARRRDFTMNALYCGPDGEVFDPLDGLDDCLAGRVRFIGDPDARIAEDRLRVYRYFRFV
VSHGNQQFDPIAIAACRRAAGGNGALSAERVGHEMLRLLSHERCASALGEMNAIGVLPSE
IVSSPGLAGLARLETFPVRVDAEMRIALMGVSGAAIGSLKAGWRLSNAVMGRIGRLVAAA
ELARGDKLAELAYRYREEREAGLAVAAAITDASESWLAARLDAIKAINPDTFPLSGSDLV
AVGHEPGPALGAELRRLESLWIDSGFSLDRKSLLALVRSA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgataccgcgctcgaacggctcaggcacgcgccctggctcgaagcggcgcgc
ccgtttttcgcttgccttgatggcgccgagggccggacacgggcagttggcggcatcgtg
agggatacgcttgtcggcattgcgaaccgccagtccgacatcgacatggccagcgaactc
ttgcccgaccaggtggcccaacgcgccagggcggcaggcatgaatgtccatccgacgggc
gtggaccacgggaccatcacgctggttcacaacgggcgcattgcggaagtcacaaccctg
cgccgggatgtggagaccttcgggcgcaaggcaaaggtctcgtttggaacggactggatc
gaagacgcaagacggcgcgattttaccatgaatgcgctctattgcggcccggatggcgaa
gtgttcgatccgctcgatgggctggacgattgccttgccggtcgtgtccggttcatcggc
gaccccgatgcgcgcattgccgaggaccggctgcgcgtctatcgctatttcagattcgtg
gtcagccacggcaatcagcagttcgatccgatcgccattgccgcctgcaggcgcgcggca
ggcggcaatggcgccctttcagccgagcgggtgggccatgagatgttgcgactgctgtca
catgagcgatgcgcctcagccctgggggaaatgaacgccattggcgtgttgccgtccgag
atcgtgtcgtcgcccggtctggccgggctggctcggctcgagacctttccggtccgggtc
gatgccgaaatgcgcatcgcattgatgggcgtttcgggcgccgcgattggttcgctcaag
gccgggtggcgcctttccaatgccgtcatgggccgtatcgggcggcttgtggctgcggcg
gagcttgcacgtggagataaattggccgagctggcctatcgatatcgcgaggaacgggag
gcgggacttgccgtcgctgccgcgatcacagatgcttcggaaagttggcttgctgcccgc
ctggatgccatcaaggccataaatcccgacacgtttccgctgtcgggttccgacctggtg
gcggtcgggcacgagcccggccccgcgttgggggccgaactgcgaaggctcgaaagcctc
tggatcgattcaggattttcgctggaccgaaagtcgctgctggcgcttgtgcggtccgcc
tga
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