Pelagibacterium halotolerans: KKY_2550
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Entry
KKY_2550 CDS
T01645
Name
(GenBank) transcriptional regulator associated with utilization of aromatics, LysR family
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phl03000
]
KKY_2550
Transcription factors [BR:
phl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KKY_2550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_20
MarR_2
YdaS_toxin
HTH_10
HTH_24
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEQ52558
UniProt:
G4RAN5
LinkDB
All DBs
Position
2544809..2545960
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AA seq
383 aa
AA seq
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MDEAGGFSAAALLLGRTQPAISRAIAQLEAIAGVKLFSRMKGHCTPTPAGEILLARAVRV
FARLSSISRRLAQTVSNRELLAAVTIARSGTLSAAARQLGLSQPAISQHLAHLESRLERP
LFIRTSASARPAPGALPVIDAMGLALAEIDQGLEEIRFLTGGSDGRLRIGALPLALPLLL
PRAIDSVLDRYPDARVAVDVGGYEGLEAGLRSGEIDAIIGSLRPGATTPDLTTRTLFEDG
LTIVASPGHPLLSHPMPRLADLAAADWVLPLPHVPLREEFDSLLAGAGLPPPARCIETNS
MTVVRALLAARARLAVVSRHQVSGDIDRGAMAKLRAPLSVRRRPVGITLRGQAQHTPLLS
AFIDALETTANTSSSFPQTGEML
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtggatgaagctggcggcttttccgccgcagcgcttcttctgggacggacccagccggcc
atttcccgggcgatcgcccagctcgaagccattgccggcgtgaagcttttctcacggatg
aaaggccactgcacccccacgcccgccggagaaatcctgcttgcccgggccgttcgcgtt
ttcgcccgcctctcgtcgatttcacggcggctggcccagacggtctccaaccgcgaactt
ctggcggcggttaccatcgcccgaagcggaacgctttcggctgccgcgcgtcaactcggc
ctctcccagcccgccatctcccagcacctcgcccacctcgaatcccggcttgaacgtccc
cttttcatccgcacttcggcatcggccagacccgctcccggcgccttgccggtgatcgac
gccatgggcctggcgctggccgaaatcgatcaggggctcgaggaaatccgttttctgacc
ggagggagtgacggacgcctgcgcattggtgccctgccccttgccctgccgctgcttttg
cctcgtgccatcgacagcgttcttgatcgctatcccgacgcccgcgtcgccgtcgacgtc
ggcggctatgaagggctcgaagcgggcctgcgctcgggtgagatcgacgccataatcggc
agcctgaggcccggcgctaccacccccgatcttacaacccgcaccctgtttgaggatggg
ttgacgatcgtcgcctcccccggccatcccctgctgtcccatccaatgccccggctcgcc
gaccttgcagcggccgattgggtgctgccgctcccccatgttccgttgcgagaggaattc
gattccttgctggccggggccggcctgccgccaccggcacgctgcatcgagaccaattcc
atgaccgtggtgcgcgcgctgcttgccgcccgggcgcggctggccgtggtctcccggcac
caggtttccggtgacatcgaccgcggtgcgatggcaaaacttcgcgcgcccctttcggtc
aggcgccgcccggtcggaattacccttcgcggccaggcgcagcataccccgctgctgtcc
gcctttatcgacgccctggaaacaacagccaacaccagttcatcatttccgcaaaccggc
gaaatgctctag
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