Pelagibacterium halotolerans: KKY_2784
Help
Entry
KKY_2784 CDS
T01645
Name
(GenBank) type IV secretion system protein VirD4
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KKY_2784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AEQ52790
UniProt:
G4RD07
LinkDB
All DBs
Position
complement(2780767..2782821)
Genome browser
AA seq
684 aa
AA seq
DB search
MPQKLHIDSALSMNLRDVHCPGLQLGITFVERGSSHVVECHLANDWQKCAFSRNFGLTLF
SKYFCDRLSAPALSRKFGLKYSLAQLSCSDLQSNVERAVSGTKILWGQLIAVFGIVLIFL
WAGTQWVAFRLGFQAQLGEPWFDIWGLPVYMPPALLWWWYLFDAYAPGIFFEGGLIAAAG
GIVAICIAVLMSVWRAREAENAETFGSARWAKPEDVKAARLLNPDGVVLGQYRHDYLRHD
GPEHILCFAPTRSGKGVGLVIPTLLTWPGSAIVHDIKGENWTLTAGFRAGFGRVLMFDPT
NPISAAYNPLLEVRRGEWEVRDVQNIADILVDPEGSMEKRNHWEKTSHSLLVGAILHVLY
AERDKTLAGVASFLSDPRRPIESTLAAMMTTPHLSKGKVHPVVASAARELLNKSDNERSG
VLSTAMSFLGLYRDPIVAKVTSTCDWRIADLASGEQPATLYLVVPPSDIARTKPLIRLIL
NQIGRRLTEDLSGVAERQRLLLLLDEFPALGRLDFFESALAFMAGYSIKAFLIAQSLNQI
EKAYGANNAILDNCHVRVSFATNDERTAKRVSDALGTATEMRAMKNYAGHRLAPWLGHLM
VSRSETARPLLTPGEIMQLPPDEEIVMLAGTPPIRARKAKYYADERLMARVLPAPNSVLD
TRAEKPHDWLAQSLAPATDGISTV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagaagcttcatatcgacagcgcgctttcgatgaatttgcgagacgtgcattgc
cccgggttgcagcttggcatcacgtttgtcgagcgtgggagcagtcatgtcgtcgaatgc
catttggcgaatgattggcagaaatgtgcgttttcccgcaattttggtctaaccctattc
agcaagtatttttgcgatcggctttctgctcctgcgctctctcgcaagttcggcttgaaa
tactctctggctcagttgtcctgttcagacttgcaatcgaatgtggagcgagccgtgtca
ggcaccaagatcctttgggggcagctcattgccgtttttggcattgtgctcatatttctt
tgggccggtacccaatgggtggcgttccgtctgggtttccaggcacaactgggtgagccg
tggttcgatatctggggtttgccggtctacatgccgcccgccttgctctggtggtggtat
ctcttcgatgcctatgcgcccggcatcttcttcgagggtgggttgatcgccgcagcaggc
ggcatcgtcgcaatctgtatagccgtgttaatgtcggtctggcgcgccagagaggccgag
aatgccgaaaccttcggctccgcgcgctgggcaaaacccgaagatgttaaggctgcgcgc
ctactcaaccccgatggtgtcgtgctgggccagtaccgacacgactacctccggcacgac
gggccggagcatattctctgctttgcgccgacgcggagcggaaaaggggtggggcttgtg
atccccaccctgttgacctggcccggctctgccatcgtgcacgatatcaaaggggaaaat
tggacgctgaccgcgggtttccgcgctgggttcggacgtgttctgatgttcgatccaacc
aatcccatctcggccgcatacaatccattgctggaagtgcggcgcggggaatgggaagtc
cgcgacgtccagaacatagcggatattctggtcgatcccgaaggcagcatggagaaaaga
aaccactgggaaaagacaagccattcgttgctggttggtgccatcctgcatgtgctctac
gcggaacgtgacaagacattggcgggggtggcgtcctttctgtccgatccacggcggccc
atcgaatccactttagccgccatgatgacgacaccccatcttagcaagggcaaagtgcac
ccggtcgtcgctagtgctgcgcgagagttgctcaacaaatccgacaacgagcgctcaggg
gtcttgagcacggccatgagctttctcgggctctatcgcgatcccattgtcgcaaaggtc
acttcgacctgcgactggcgcatagccgatctggcttctggcgaacagccagccacgctc
tatctggttgtgcctccctcggatatcgctcgcaccaagcctctaatccgactcattctc
aaccagattggtcggcgattgaccgaggacctgtctggggtagcggaacgtcaacggctg
ctcttgctgttagatgaatttccggcgctggggcggctcgatttttttgaaagcgcgctc
gcctttatggcggggtattcgatcaaggcgttcctgatcgctcagagcctcaatcaaata
gaaaaggcctatggtgcaaacaacgccattctcgacaattgccacgttagggttagcttc
gcgaccaacgatgagcgcactgccaagagggtttccgacgcgctaggcacggccacagag
atgcgggcaatgaaaaactatgccggacatcgcctggcaccctggttgggccatctgatg
gtatcccgctcggaaaccgcgcggcctctgcttacgccgggggagatcatgcaactccct
cccgacgaagaaatcgtcatgttggccggcacacccccgatacgcgcgcgcaaggcaaag
tactacgccgacgagcgtttgatggcccgcgtgctgccggcgcccaattcggtgctcgat
accagagcagagaaaccgcatgattggttggctcaatccctggctcctgcgacggacggt
ataagcacggtataa
DBGET
integrated database retrieval system
