Pelagibacterium halotolerans: KKY_2984
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Entry
KKY_2984 CDS
T01645
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl00300
Lysine biosynthesis
phl00470
D-Amino acid metabolism
phl01100
Metabolic pathways
phl01110
Biosynthesis of secondary metabolites
phl01120
Microbial metabolism in diverse environments
phl01230
Biosynthesis of amino acids
Module
phl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KKY_2984
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KKY_2984
Enzymes [BR:
phl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KKY_2984
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Lactococcin
Motif
Other DBs
NCBI-ProteinID:
AEQ52978
UniProt:
G4RFH6
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All DBs
Position
complement(2966386..2967666)
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AA seq
426 aa
AA seq
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MVHHFTYRGGWMFAEDVDLTAVAEEIGTPFYCYSQATFTRHIEVMMNAFSGTDTLVAYAM
KANSNQAMLAIAAQKGIGADVVSLGELERALRAGIPAQKIIFSGVGKSRAEMRRALDVGI
LCFNVESEPELERLNAVAAEMDRIAPVSVRINPDVDAKTHAKISTGKSENKFGIPYARAE
AVYGRIAACKNLKAVGVDMHIGSQITELEPFDNAFKLLAELVGRLRAAGHDIGHVDVGGG
LGIPYQQDNSPPPDPVEYAKLVRRHTDPLGCKVILEPGRLIAGNAGVMVTRVEYVKKTDK
KSFVIVDAAMNDLIRPTLYEAHHDILPMQEAGAGANTIRADIVGPVCETGDYLGLDREMA
EVAEGDLLVVMSAGAYGAVMSSTYNTRPLIAEVLVEGGKWHVVRPRQTLDELIGLDSVPE
WVRAGD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggttcatcattttacctatcgcggcggctggatgtttgccgaggatgtcgatctgacg
gcggtggccgaggagatcggcacgccgttctattgctattcgcaggcgacattcacccgg
catatcgaggtgatgatgaacgcgttttcgggcaccgacacgctggtcgcctatgccatg
aaggccaattccaaccaggcgatgctggcgattgccgcgcaaaagggcatcggggcggat
gtggtgtcgctgggagaattggagcgggcgctgcgggccgggataccggcgcaaaagatc
atcttttcgggggtcggcaagagccgggccgagatgcggcgggcgctggacgtgggaatc
ctgtgtttcaacgtcgaaagcgaacccgaactggaacggctcaacgcggtggccgccgag
atggacaggatcgcgccggtctcggtgcggatcaatcccgatgtggacgcgaaaacccac
gccaagatttcgacgggcaaatcggaaaacaagttcggcattccctacgcgcgggccgag
gcggtctatggacggatcgcggcgtgcaagaatttgaaggcggtgggcgtcgatatgcat
atcggcagccagatcaccgaactcgaaccgttcgacaacgcctttaagctgctggccgaa
ctggtcggacggctgcgggcggcggggcatgacatcggccatgtcgatgtcgggggcggg
ctggggataccgtaccaacaggacaattcacccccgcccgatccggtggaatatgccaag
ctggtgcggcggcataccgatccgctggggtgcaaggtgatccttgaaccgggccggctg
atcgcgggcaatgccggggtgatggtgacgcgggtcgaatatgtcaaaaagaccgacaaa
aagagctttgtcatcgtcgatgcggcgatgaacgatctgatccgccccacgctttacgag
gcccatcacgatattctgcccatgcaggaagcgggggcgggggccaacaccattcgcgcc
gatatcgtggggccggtgtgcgagacgggcgattatctcgggctcgaccgggagatggcg
gaggtggccgagggcgatctactggtggtgatgagcgcgggcgcttatggcgcggtgatg
agctcgacctacaacacccgcccgctgatcgccgaagtgctcgtcgagggcgggaagtgg
catgtggtgaggccacggcagacgctggatgagctgattgggctcgatagtgtgccggag
tgggtgcgggcgggggattga
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