Pelagibacterium halotolerans: KKY_3501
Help
Entry
KKY_3501 CDS
T01645
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_3501
Enzymes [BR:
phl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KKY_3501
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KKY_3501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
NPHP3_N
AAA_30
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AEQ53486
UniProt:
G4R9F2
LinkDB
All DBs
Position
complement(3460988..3464401)
Genome browser
AA seq
1137 aa
AA seq
DB search
MSREDLSVPPDTNAKQARVADPRANAWVSANAGSGKTYVLSRRVLRLLLDGAAPEAILCL
TYTKAAAAEMRHRVTGILARWARADEAELERELAELLGQRASASEKLKARSLFAHALDTP
GGLKINTIHAFCEAVLQRFPREAGVPVNFTVIEEADATALLREAREGVIAEGLKAGGPVG
EAVRALFDALSDSQIETAIGQCLDNSRKLGPILADPERAIGAMRAGLGLGAGETIERFNR
EVVDGMLVATAEYPAIWSLTPPGVAKRAGFEDKLERVDRTSPTASQLFAAYLTAAGTAPK
RGFPAKAIATAMPELAERLAAEAERLEALFEKSKALTIAENSAALTRVLAAILKRYETQK
RARSLMDFDDLVARTAALLGDRGMGEWVRYKLDAGIDHILVDESQDTNPEQWAVIDALID
DYFSGTGAAQRPKTIFAVGDPKQSIYSFQGAEPKLFLDKGRALAAAARAAGREWYGETLE
TSFRTLEEILEGVDKVFGRPDIAASLLAETIRHEAARTRKGGRIEIWPVIENPDSPEIPE
AWPTEPVESLAAAPKQLANRIADTIAGWIESRAPVGPGGRAIRPEDILILVQKRKGIFPE
IVRALKQRNIASPGADRLPVSAHIAIDDLLGLADFLLNPADDLTLAAILRSPLFAISEEQ
LFTLAHGRGKLSLYERLGASDMEAAQAAYQRLGGLRQRLDFDRPYEFFAHVLYQQGGLKQ
FHARLGEEVDEVIAEFLDLALEHETSDQPSLTGFVAAMRASDIVIKRDLVARAAGVRVMT
VHGAKGLEAPVVILADAATKPRAVSDCVFFGTHDGDAFLLYCPGKDSHCEASRPLRAEVE
ARNIAEYWRNLYVGMTRAEEALHIAGTLDSRTKVEETWFGAVSGALGGESATTSDHRGDV
LRFPALEASAVAAGEAGDDVRAATQPLTLGPPPRRAGLPIITPSRHDDVWAPLGLETAAE
SLLDARGARMRGIALHTLLQHLSAAPQERREAVALSAAQTLLPDDPELAGPVAERGLAIL
SDPDLAGLFGTDSRAEVPFSIVVRQGDANARLEGRIDRLVAGESVLVVDYKSDGMVPERP
EAVSAGYVHQLALYRLAAQRLFAGRRVEAAILWTENSRLMTLPAGLLDAAVGDVTVL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggaagacctttccgtcccgcccgataccaatgccaagcaggcgcgggtggcc
gacccgcgggccaatgcctgggtttcggccaatgccggatcgggcaaaacctatgtgctc
tcgcgccgggtgctgcggctgctgctagacggggctgcgccggaggcgatcttgtgcctg
acctataccaaggcggcagccgccgaaatgcggcaccgggtgacgggcattctggcccgg
tgggcgcgggcggacgaggccgagctcgagcgcgaactggcggagcttttggggcagcgg
gccagcgcatccgaaaagctcaaagcgcggagccttttcgcccatgcgctcgatacgccg
ggcggactcaagatcaacaccatccacgccttttgcgaggctgtgctgcagcgctttccg
cgcgaggcgggggtaccggtcaatttcacggtgatcgaggaggcggacgccacggcgctg
ttgcgcgaggcgcgcgagggggtgatcgccgaggggctcaaggcaggcggcccggtgggc
gaggccgtacgggcgctgttcgatgcgctcagcgacagccagatcgaaaccgcgattggc
caatgtctggacaacagccgcaagctgggaccgatccttgccgatcccgagcgggcgatt
ggggcgatgcgggccgggctggggctgggggcgggcgagacaatcgaaaggttcaatcgc
gaggttgtggacgggatgctggttgcgaccgccgaatatccggccatctggtcgctgacc
ccgcccggggtggccaaacgggccgggttcgaagacaagcttgaaagggtcgacaggaca
tcgcccaccgccagccagcttttcgccgcttatctcacggcagcggggacggcgcccaag
cgcgggtttccggccaaggcgattgccaccgccatgcccgagcttgccgagcggctggcg
gcggaggccgagcggctcgaagcgctgtttgaaaaatccaaggcgctgactatcgccgag
aacagcgcggcgctgacgcgggtgctggcggcgatcctgaagcgctacgagacacagaag
cgggcccgttcgcttatggatttcgacgatctggtggcgcgcacggcagctctgctcggc
gacaggggcatgggcgaatgggtgcgctacaagctcgatgcggggatcgaccatattctt
gtcgatgagagccaggacaccaatcccgagcaatgggcggtgatcgacgcgctgatcgac
gattatttttccgggactggggcggcgcaaaggcccaagacgatctttgcggtgggggac
ccgaaacaatcgatctattcgtttcagggggccgagccgaaactgtttctggacaagggc
cgcgcgctggcggccgcagccagggcggcggggcgcgagtggtacggggagacgctggaa
accagctttcgcacgctcgaagaaatccttgagggcgtcgacaaggtgtttggccggccc
gatatcgcagcatcgcttctggccgagacgatccggcacgaggcggcacggacgcgaaag
ggcgggcggatcgaaatctggccggtgatcgaaaatcccgacagcccggagatccccgag
gcctggccgaccgagcccgtggaaagccttgcggcggcgccaaagcaattggccaacagg
attgccgatacgattgccggctggatcgaaagccgggctccggtcgggccgggggggcgg
gcgatccggcccgaggacatcctgatcctcgtccagaagcgcaaggggatttttcccgag
atcgtgcgggcgttaaagcagcgcaatatcgccagccccggcgccgaccggctgccggtt
tcggcccatatcgccatcgacgatcttctgggacttgccgatttcctactcaacccggcc
gacgatctgacgctggcggcaatcctgcgttcgccgctgtttgcgatttccgaggagcaa
ttgttcacgctggctcatgggcggggaaaactgagcctttacgagcggctgggcgcgagc
gatatggaggcggcgcaggcggcttatcagcgcctaggcgggctgcggcagcggctcgat
ttcgaccggccatacgagtttttcgcgcatgtgctctaccagcagggcgggctgaaacag
tttcacgcgcggctgggcgaggaagtggacgaggtgatcgccgaatttttggatctggcg
ctcgagcacgagacgtccgatcagccctcgctgaccggattcgtggcggcgatgcgggcg
tccgacatcgtcatcaagcgcgatctcgtggcccgggcggcgggcgtgcgggtgatgacg
gtgcatggagccaaggggctcgaagcgcccgtcgtgatccttgccgatgcggcgaccaag
ccgcgggcggtgtccgactgcgtctttttcggcacccatgatggcgatgcgtttttgctc
tattgcccgggcaaggacagccattgcgaggcgtcgcggccgctgcgggccgaggtggag
gcgcgcaatatcgctgaatattggcgcaatctctatgtggggatgacgcgggccgaggag
gcgctgcacattgcgggcacgctcgacagccggacaaaggtcgaggaaacctggttcggg
gcggtctcgggcgcgctgggcggcgagagcgccacgacctccgaccatcggggcgatgtg
ttgcggtttccggcgctggaagccagtgcagtggcggctggggaggcgggcgatgatgtg
cgtgccgcaacgcagccattgacgctggggccgccgccaagacgggccgggctgccgatc
atcaccccatcgcggcacgatgacgtgtgggcaccgttggggctggaaacggctgcggaa
agcctgctcgatgcgcgcggggcccggatgcgggggattgccctgcacacgctgctgcag
catttgagtgccgcacctcaggagcgcagggaggctgtggcgctgagcgcggcgcagacg
cttttgcccgacgatccagagcttgccgggccggtggccgagcggggcctggcgatcctt
tccgacccggatctggccgggctgttcggcactgacagccgggccgaggtgccgttttcg
attgtggtgcgacagggcgacgcgaatgcgcggctggaagggcggatcgacaggctggtg
gcgggggaaagcgtgctggttgtcgattataaatccgatggcatggtgcccgagcggccc
gaagcggtttcggcgggctatgtgcaccaattggccctgtaccggctggcggcgcagcgg
ctttttgcgggcaggcgtgtcgaggcggcgatcctgtggacggaaaattcgcgcctgatg
acccttcccgccggtctgctcgacgcggcggtgggcgacgtcacggtgctgtga
DBGET
integrated database retrieval system
