Pelagibacterium halotolerans: KKY_3719
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Entry
KKY_3719 CDS
T01645
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03030
DNA replication
phl03410
Base excision repair
phl03420
Nucleotide excision repair
phl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKY_3719
03410 Base excision repair
KKY_3719
03420 Nucleotide excision repair
KKY_3719
03440 Homologous recombination
KKY_3719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phl03032
]
KKY_3719
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_3719
Enzymes [BR:
phl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKY_3719
DNA replication proteins [BR:
phl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KKY_3719
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KKY_3719
NER (nucleotide excision repair)
GGR (global genome repair) factors
KKY_3719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AEQ53701
UniProt:
G4RBR0
LinkDB
All DBs
Position
3693539..3696430
Genome browser
AA seq
963 aa
AA seq
DB search
MHLVLVDGSSFIFRAYHALPPLTRKSDGLPVGAVSGFSNMIFKLTEDLKGENEPTHFAVI
FDYSGTSFRNELYDQYKAHRPEAPEDLIPQFPLTRAATRAFCLPSIEQEGYEADDIIATY
ACQMRDRGGKVTIVSSDKDLMQLIDDDHVQMLDTIARPGQPPMRWMGPEEVMKKFGVTPD
KVVDVQSLCGDPVDNVPGIPGIGVKTAALLINEYGDLETLLARASEIKQQKRRESIIEHA
DLARISKKLVQLDCNMPLDVPLDDLVRQPLEAKTLIPFLKAMEFTSITRRVASVLEIDPD
DFEPDAELAAKGASIPGAIDVSDGPAPASGVAGPDAHAEKVLEAIRAIPCNLDDYEIVRD
ETALANWIADIVATGHVAVDTETTGLDNQAADLVGICLSTRPGKACYIPLGHTTGNDDMF
GGGRAEGQMDMRLALDMLRPVLEDPAILKIGQNVKYDMGIFARYAITMAPIDDTLLMSYA
LDGARNNGMDALALRWLDHTCLKFTDLAGTGKNQLTFDKLEIEPAAKYAAEDADITLRLW
HILKPRLVAQGVTTVYETLDRPLTPVLARMEARGVSVDRQILSRLSGDFAQRAAALEETA
YELAGEKFNLGSPKQLGDILFGKMGLEGGTKTKTGAWATGASVLDDLAAQGVPLAQTILD
WRGVTKLRSTYTDALPSYINERTKRVHTSYNQASVATGRLSSNEPNLQNIPIRTEDGRKI
RTAFIAAPGNLLISADYSQIELRVLAHIADIDALKDAFEEGLDIHAMTASEMFGVPIEDM
DPMVRRRAKAINFGIIYGISAFGLANQLGIARSEAGEYIKTYFARFPGIQDYMAEQRRIV
KAQGYVSTIFGRKIPFENVNTKNPSERAFIERASINAPIQGSAADIIRRAMIRMERILTE
ENVPADMLLQVHDELIFEAPADKAEQAIPIIKRVMEGAAEPALRLSVPLQVDAKAAENWE
AAH
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgtcctcgtcgacggctcgtccttcatcttccgcgcctatcacgcgctgccg
cccttgacgcgcaagtccgacggtctgccggtcggcgccgtctcgggcttttccaacatg
atcttcaagctcaccgaggatctcaagggcgagaacgagcccacccatttcgctgtgatc
ttcgattattcgggcaccagtttcagaaacgagctttacgaccagtacaaggcccaccgc
cccgaggcgcccgaggatctgatcccccagttcccgctcacccgcgccgccacccgcgcc
ttctgcctgccctcgatcgagcaggagggctacgaggccgacgacatcatcgccacctat
gcctgccagatgcgcgatcgcggcggcaaggtcaccatcgtctcctccgataaggatctg
atgcagctcatcgacgacgatcacgtccagatgctcgataccatcgcccgcccgggccag
ccccccatgcgctggatgggtcccgaggaggtgatgaaaaaattcggcgtcacccccgac
aaggtcgtcgacgtccagtccctgtgcggcgatccggtcgataacgtccccggcattccc
ggcatcggggtgaaaaccgccgccctgctcattaacgaatatggcgatctcgaaaccctt
ctggcccgcgcttcggagatcaagcagcaaaagcgccgcgaatcgatcatcgaacacgcc
gatctggcccgcatttccaaaaagctcgtccagctcgattgcaacatgccgctcgacgtg
ccgctggacgatctggtccgccagcccctcgaagccaaaacgctgatcccgtttctcaag
gccatggagttcacctccatcacccgccgcgtcgccagcgtgctcgaaatcgaccccgac
gatttcgagcccgatgccgaactggccgccaagggcgcctcgatccccggcgcgatcgat
gtgtccgatggccccgcccccgcctcgggcgtggccggccccgatgcccacgccgaaaaa
gtgctggaggccatccgcgccatcccctgcaatctcgacgattacgagatcgtccgcgac
gaaaccgcgctcgccaactggatcgccgatatcgtcgcgacgggccatgtcgccgtcgat
accgaaaccaccgggctcgacaaccaggccgccgatctggtcggcatctgcctgtcaacc
cgtcccggcaaggcgtgctatatccccctcggccacaccaccggcaatgacgacatgttc
ggcggcggccgagccgaaggccagatggatatgcgcctcgccctcgatatgctgcgcccg
gtgctggaagacccggcaatcctcaagatcggccagaacgtcaaatacgacatgggcatt
tttgcccgctatgcgatcaccatggcccccatcgacgatacgcttctgatgagctacgcg
ctcgatggcgcccgcaacaacggcatggacgcgctggccctgcgctggctcgatcacacc
tgcctcaaattcaccgacctcgccggcaccggcaagaaccagctcaccttcgacaagctc
gaaatcgagcccgccgcgaaatacgccgccgaagacgccgatatcaccctgcgcctctgg
catatcctcaagccccgccttgtcgcccagggcgtcaccacggtttacgaaaccctcgat
cgcccattgaccccggtcctcgcccgcatggaagcgcgcggcgtgtcggtcgatcgccag
atcctctcgcgcctctcgggcgatttcgcccagcgcgccgccgcgctggaagaaaccgca
tacgaattggccggcgaaaagttcaatctcggctcccccaagcaattgggcgatatcctg
ttcggcaagatgggcctcgaaggtggcacaaagaccaagaccggcgcctgggccacgggc
gcctccgtgctcgacgatctggccgcgcaaggcgtgcccctggcccagaccattctcgat
tggcgcggcgtcaccaaattgcgctcgacctacaccgacgcgctgccctcctatatcaat
gagcgcaccaagcgcgtccacacctcatacaaccaggcttcggtcgccaccgggcgcctc
tcgtccaacgaaccgaacctgcaaaacatccccatccgcaccgaggatggccgcaagatc
aggaccgcgttcatcgccgcgccgggcaatcttctgatttctgccgattactcccagatc
gagctgcgcgttctcgcccacatcgccgatatcgatgcgctcaaggacgccttcgaggag
ggcctggacattcacgccatgacggcgtccgaaatgttcggcgtgcccatcgaggacatg
gaccccatggtccgccgccgcgccaaggcgatcaatttcggcatcatctacggcatttcc
gccttcggcctcgccaaccagctcggcatcgcccggtccgaggccggggagtacataaaa
acctatttcgcccgcttccccggcattcaggattacatggccgaacagcgccgcatcgtg
aaggcccagggctacgtctcgacgatcttcggccgcaaaatcccgttcgaaaacgtcaac
accaaaaacccgtcggaacgcgccttcatcgaacgcgcctcgatcaacgcccccatccag
ggctcggcggcagatatcatccgccgcgccatgatccgcatggaacgcattttgaccgag
gaaaatgtccccgccgatatgctcctgcaggtccacgacgaactgattttcgaggccccg
gcagacaaggccgaacaggccatcccgatcatcaagcgcgtgatggaaggggcggcggaa
ccggcgctgaggctgtcagtgccgttgcaggtggatgccaaggctgcggagaattgggaa
gcggcgcattag
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