Pelagibacterium halotolerans: KKY_3766
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Entry
KKY_3766 CDS
T01645
Name
(GenBank) transcriptional regulator, LysR family
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phl03000
]
KKY_3766
Transcription factors [BR:
phl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KKY_3766
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_29
HTH_28
HTH_30
HTH_24
HTH_23
MarR_2
DUF134
Motif
Other DBs
NCBI-ProteinID:
AEQ53748
UniProt:
G4RCF4
LinkDB
All DBs
Position
complement(3747860..3749428)
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AA seq
522 aa
AA seq
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MNQILGSKPLFYRVSEPQNRFHFCWTRSKGRWRLQGANSVRGGEEAWRIELRAEMRALNS
ILVLKIACESWPLSNPNGRTASTVHDQADLFSSTRKADIEISARWLAYRAGTGHKVGRSR
PRARGARSKMVRHELNLRHLRLMLAVAQTGSVTKAAQMCNISQPAVTQALKKLEAHFGVP
LFDRNLNGVFVNGTGRILASRVERAMGLLDAAAGTLGTAPRLTASTARLKALVEVAHAEN
FSIAARNMGIAQPTIHRAITQLEEEVGRSLFQRTQFGSIPTRSGQLLAQAAQLAFAELAQ
AEMEIAEAVGRGTLSITIGGMPLSRSYVLPGTIAAFQARHADVHFRIVEGPYDTLLAGLR
RAEIDLLFGALRSPAPVDDVIEEHLFNDELVIVSGPNHPLTRDGAPDFSQALAFPWVVAI
PGTPARDQFDAHILKMGAMLPATLVETSSMILMRELLHKGPYLGAVSRLQAESEIGNGLM
IPLPLAIEESRRAIGLTTRANWKPTPMQDEFLNLIRAEFKSR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaatccttggctctaagcctttgttttatcgcgtgtccgaaccgcaaaaccgt
ttccacttttgctggacacgctctaaaggccgatggcggctgcagggcgcgaattcggtg
cgcggcggcgaggaggcatggcggatcgaattgagggcggaaatgcgcgccctcaattcg
atcctggttctcaaaatcgcttgcgaaagctggcccctgtccaatccgaacggcaggaca
gcgtcgaccgtacacgaccaagcagacttattttcgtccacacgaaaagccgatatcgag
atttccgcgagatggctggcctatcgggctggcacagggcataaggtggggcgatcccga
cctcgagcgcgcggtgcacggtcaaagatggtacgacacgagctcaatctgcgtcatttg
cggctcatgcttgccgtggcccagacgggatcggtcaccaaggcggcgcagatgtgcaac
atatcccagcccgcggtgacccaggcgctcaagaagctcgaagcccattttggcgtgccg
ctgttcgaccgcaatctcaatggggtctttgtcaatggaaccgggcgcatactggcgtcg
cgcgtcgagcgggccatggggttgctcgatgccgcggccggaacgctcggcacggcgccg
cggctgacggccagtacggcgcggttaaaggcgctggtcgaagtggcgcatgctgaaaac
ttttccatagcggcccgcaatatgggtattgcgcaacccaccattcatcgggcgatcacc
cagctcgaagaggaggtggggcgctcattgttccagcgcacccagttcggatcgatcccc
acccgatcggggcagcttctggcccaggcagcccagctcgcattcgcggagttggcgcag
gccgaaatggagattgccgaagcggtggggcgcggcacgctttcgatcacgatcgggggc
atgccgctttcacgctcctatgtgctgccgggaacgatcgccgcgtttcaggcccggcac
gccgacgttcatttccggattgtcgaggggccctatgacacgctgctggcggggctgcgc
cgtgccgagatcgatctgctgttcggggcactgcgcagtcccgctccggtggacgacgtg
atcgaggagcacctgttcaatgacgagctggtgatcgtttcgggtccaaaccatccgttg
acccgggacggggcgcccgatttttcccaagcgctggcgtttccctgggtggtggccatt
cccggcacgccagcccgcgaccagttcgatgcccatatcctcaagatgggcgcaatgctg
ccggcgacgcttgtcgagaccagttcgatgatcctgatgcgcgaattgctgcacaagggc
ccctatctgggcgcggtttcacgattgcaggcggaaagtgaaatcggcaacgggctgatg
atcccgctgccgctggcgatagaggagagccgtcgcgccatcggactgaccacacgggcc
aattggaagcccaccccgatgcaggacgaatttctcaacctgatccgagcggaattcaag
agccgttaa
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