Pelagibacterium halotolerans: KKY_3920
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Entry
KKY_3920 CDS
T01645
Name
(GenBank) putative binding-protein-dependent transport protein (periplasmic)
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
phl
Pelagibacterium halotolerans
Pathway
phl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KKY_3920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phl02000
]
KKY_3920
Transporters [BR:
phl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KKY_3920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5111
Motif
Other DBs
NCBI-ProteinID:
AEQ53901
UniProt:
G4REG9
LinkDB
All DBs
Position
3914711..3916288
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AA seq
525 aa
AA seq
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MRNTLSGIAVALFASTMLVGAASAETLRWARQSDALTLDPHSQNQGVTHTFNHHIYETLL
DRDVEGNLQARLATDWYVKEGDETVWVFELREGVTFHGGEEFTAEDVVFSIERAKSENSN
MRQLHADVESVAAVDDYTVEFQMAGPSPLYPNNITNTFIMDKGWSEENDLTEVQDFAAGE
ENFAVRNTNGTGPYVLAERDPDVRSVLTVNEDWWGDAPAVTEIVYTPIADNATRVAALLS
GEVDLVQDVPVQDIERLAGTDGIKVETGPENRTIYFGYAMDDEPLISSNITDENPFANPL
VREAMSLVIDREAIRQVVMRGQSLPTCVNMPPFVNGWTEELDACPAVDVERATELMAEAG
YPDGFSVTLDTPNDRYVNDEAIAQAVVGMLGQIGIDVTLASRPVAQHSPLILNNETDFYL
LGWGVPTFDSAYNFNDLVHTKDDEYGTYNIGLYSNPEVDEMIESLGTMTDLDARNAVIAD
IWAQVQEDRVFIPVHNQVLAYAMRGDMTLAVHPENQPSMTGVVFE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacgctctccggcattgcggtggcactttttgcctccaccatgcttgttggc
gcggccagcgccgaaacgctgcgctgggcccgtcagtccgatgctctcacgctcgatccg
cactcccagaaccagggcgtgacccacaccttcaaccaccacatctacgagacccttctc
gaccgcgatgtggagggcaatcttcaggcgcgcctggcgaccgattggtacgtcaaggaa
ggcgacgaaaccgtctgggtcttcgagctccgtgaaggcgtgaccttccacggtggcgaa
gagttcaccgccgaggacgtggtgttctccatcgagcgcgccaagtccgaaaattccaac
atgcgtcagcttcacgccgacgtggaaagcgtggctgccgtcgacgactacactgtcgaa
ttccagatggccggcccgtccccgctctatcccaacaacatcaccaacaccttcatcatg
gacaagggctggtcggaagaaaacgaccttaccgaagtccaggattttgctgccggtgag
gaaaacttcgccgtccgcaacaccaacggcaccggcccctatgtcctcgccgaacgcgac
cccgacgtccgctcggtgttgacggtgaacgaagattggtggggcgatgctcctgccgtc
accgagatcgtctacaccccgatcgccgacaacgcgacccgcgtcgctgccctgctttcg
ggtgaagtcgatctggtgcaggacgttcccgtccaggatatcgagcgcctcgcgggcacc
gacggcatcaaggtcgagaccggccctgaaaaccgcacgatctatttcggctacgccatg
gatgacgagccgctcatcagctccaacatcaccgacgaaaaccccttcgccaacccgctg
gtgcgcgaagccatgtcgctggtcatcgaccgcgaggccattcgtcaggtcgtgatgcgc
ggccagtcgctgcccacttgcgtcaacatgcctccgttcgtgaacggctggaccgaagag
ctcgacgcctgcccggcggtcgatgtcgaacgcgcaaccgagctgatggctgaagccggc
tatcccgatggcttctcggtcaccctcgacacccccaatgaccgctacgtcaacgacgaa
gcgatcgctcaggctgtcgtgggcatgctcggccagatcggcatcgatgtgaccctggcc
tcgcgcccggtcgcccagcactctccgctcatcctcaacaacgagacggatttctatctc
ctgggctggggcgttcccaccttcgattccgcttacaacttcaacgatctggttcacacc
aaggacgatgaatacggcacctacaacatcggtctctattccaacccggaagtcgatgaa
atgatcgaatcgctgggcaccatgaccgatctcgatgcccgtaacgcggtgatcgccgac
atctgggcccaggttcaggaagatcgcgtcttcatcccggtccacaatcaggtgctggcc
tacgccatgcgcggtgacatgaccctcgccgtgcatccggaaaaccagccctccatgaca
ggggtcgtcttcgagtaa
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