Pelagibacterium halotolerans: KKY_393
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Entry
KKY_393 CDS
T01645
Name
(GenBank) transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
KKY_393
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
DUF460
Motif
Other DBs
NCBI-ProteinID:
AEQ50437
UniProt:
G4R9L7
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Position
386530..388833
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AA seq
767 aa
AA seq
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MTDIAKAIAGLIATEIAARPEQVRAAVDLLDSGATVPFVARYRKEVTGGLDDAQLRTLET
RLGYLRELEARRAAILQSVDSQGKLTSELAAQIARVMTKSELEDIYLPYKPKRRTKAEIA
RERGLEPLADALFEDRTLAPPVEAEKYLSDDVPDARTALEGARDILAERFAENAELIGRL
RDYMERKAVLRARVIDGKQEQGAKFSDYFDHAEAWSKVPSHRALAMLRGRNEEVLAVDLE
LDADTEGKYRPAETMVAAHFGIRADGGPVDQWLMDVARWSWRVKLWLHLSVDLMGRLRER
AEDEAISVFARNLKDLLLAAPAGNRATMGLDPGIRTGVKVAVVDATGKVLDTATIYPFQP
RNDVQGSFAALMALIARHKVDLIAIGNGTASRETERLVTDMLSMIPAPKPMKVVVSEAGA
SVYSASETASNELPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQYRLA
RALDAVVEDAVNAVGVDLNTASAPLLARVSGLGSSLAEAIVAHRDANGAFSARKQLLSVA
RLGPKAFEQAAGFLRIRDGSEPLDASSVHPEAYGVARKIVAACGRDIRQLMGDSTVLKKL
DPHSFVDDTFGLPTVRDILAELEKPGRDPRPEFKTATFAEGIEEISDLRPGMMLEGTVTN
VAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVKVLEVDAKRKRISLSMR
RDAAPDRNAESRRPERNAPRPKKNAQPSSPSQGALGAALSEALRRDK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcgcaaaagccatcgccggacttatcgcaaccgaaattgcagcccgcccc
gaacaggtgagggcggccgttgacctgcttgatagcggcgccaccgttccctttgttgcg
cgttaccgcaaggaagtcaccggcgggctcgatgatgcgcagttgcgcacgctggaaacg
cggctcggttatctgcgtgagctggaagcgcgccgggcggcgatccttcagtccgtcgat
tcacagggcaaactcaccagcgagctggcagcccagattgcccgggtcatgaccaaatcc
gagcttgaggatatctaccttccctacaagcccaaacggcgcaccaaggcggagatagcg
cgcgagcgcggcctggagccgctggctgatgctctgttcgaagaccgtacgctcgccccg
ccggtcgaggccgaaaaatacctctcggacgatgtgcccgatgccagaacggcactcgaa
ggcgcccgcgatattctcgccgaacgctttgccgagaatgccgagctgataggccggcta
cgcgattatatggaacgcaaggccgtgctgcgggccagggtcatcgatggaaagcaagag
cagggcgccaaattttccgactatttcgatcacgccgaagcctggtccaaagtccccagt
cacagggccctggccatgctgcgcgggcgcaacgaagaagtgctggccgtcgatctcgaa
ctcgatgcggataccgaaggaaaatacaggccggctgaaaccatggttgccgcccatttc
ggcatccgcgccgatggcggaccggtcgatcagtggctgatggatgttgcgcgctggagc
tggcgggtcaaactctggttgcacctgtcggtcgacctgatggggcgtttgcgcgaacga
gccgaggacgaggccatctcggtttttgcgcgaaatctcaaggaccttctgttggccgca
cccgcgggtaatcgtgccaccatggggctggatcccggtattcgcaccggggtcaaggtg
gccgtggtcgatgccaccggcaaggtcctcgataccgcgaccatctatccgttccagccc
cgcaacgatgtgcagggcagcttcgccgcactcatggccctgattgcccggcacaaggtc
gacctgatcgccatcggcaacggcaccgccagccgagagacggagcggctggtcacagac
atgctgtcgatgatcccggcgcccaagcccatgaaagttgtggtcagcgaagcgggcgcc
tcggtctattcggcctcagagacggcctcgaatgagctgcccgggctcgacgtctcgctg
cgcggcgccgtctccattgcccgccgcctgcaggatccattggccgaactggtcaagatc
gaacccaaatcgatcggcgtgggtcaatatcagcacgatgtcgatcaataccggctcgcc
agggcgctggatgccgtggtggaagatgcggtgaatgcagtgggcgtcgaccttaacacc
gcatcggcgccactgttggcacgagtgtccgggctcggctcatcccttgctgaagccatc
gttgcccatcgcgatgccaacggagcgttttcagcgcgcaagcaattgctgtcggtcgct
cgcctcggccccaaggccttcgagcaggcagcagggtttttgcgcattcgcgatgggtcc
gaaccgctcgatgcgtcttcggtccacccggaagcctatggtgtagcccgaaagatcgtt
gcggcttgtggtcgtgatatccgccaattgatgggcgacagtacagtgctcaaaaaactc
gatccacacagctttgtcgacgacacattcgggctgcccaccgtgcgcgatattcttgcc
gaactcgaaaaacccggccgtgacccgcgccccgaattcaagacagcgacttttgccgag
ggcatcgaagaaatatccgatctcagaccgggcatgatgctcgaagggacagtgaccaac
gttgccgccttcggcgcctttgttgatatcggcgtgcatcaggacggcctcgtccacgta
tcccaactcgccgaccgcttcatcaaggatgctcacgaggtcgtcaaggctggcgatgtg
gtaaaggtcaaagtgctcgaagtcgacgcaaagcgaaagcggatcagcctctccatgcgc
cgcgatgcggcccccgaccgcaatgccgagtcacgtcggccggagcgcaatgcgccacga
ccgaaaaaaaacgctcaaccctcgtcaccatcacaaggcgccctcggcgcagcattgagc
gaggcgctgcgccgggacaaatag
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