Pelagibacterium halotolerans: KKY_56
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Entry
KKY_56 CDS
T01645
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phl03016
]
KKY_56
Enzymes [BR:
phl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KKY_56
Transfer RNA biogenesis [BR:
phl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KKY_56
Prokaryotic type
KKY_56
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Adeno_VII
FlgD_ig
Motif
Other DBs
NCBI-ProteinID:
AEQ50104
UniProt:
G4RGC8
LinkDB
All DBs
Position
56922..57659
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AA seq
245 aa
AA seq
DB search
MPRYKLTIEYDGTPFVGWQRQADALSVQEALEIAIEAFSGETVRTQTAGRTDAGVHARGQ
VAHFDLDREWDPFRVSEALNYHLKPHPIVIVHCEMAGEDFEARFSAKARHYRYLILNRRA
RPALDVDKVWHVAVPLDEKAMHEAAQTILGRHDFTTFRSAQCQANSPLRTLDRLDVKREG
DLVTIEASARAFLHHQVRSMTGSLKLVGEGRWPVTGLRAALDAKDRSRCGAMAPSSGLYL
MAIDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctacaagctgacaatcgaatatgacggaactcccttcgtgggctggcagcgc
caggccgatgcgctctcggtacaggaagcgctcgaaatcgccatcgaggcgttttccggc
gagaccgtgcgcacccagacggcgggccgtaccgatgccggcgttcacgcaaggggacag
gtggcccatttcgatctcgaccgcgagtgggacccctttcgcgtgtccgaggcgctgaac
tatcatctcaagccccatccaatcgtcatagtgcactgcgagatggcgggcgaggatttc
gaggcgcgcttttcggccaaggcgcgccattaccgctatctgatcctcaaccgtcgtgcc
cgtcctgcgcttgacgtggacaaggtgtggcatgtcgcggtgccgctcgatgagaaggcc
atgcacgaggcggcgcaaaccattctgggccggcatgatttcacgacgttccgctcggcc
cagtgccaggccaattcgcctctccgtacgctcgacaggctggatgtgaagcgcgagggc
gatctggtgactatcgaggcttcggcgcgcgcctttttgcatcatcaggtgcgctcgatg
accgggtcactcaagctcgtgggggaagggcgctggccggtgactggcctgagagcagcg
ctcgatgcaaaagacagatcgcggtgcggggccatggctccatcctccgggctctatctg
atggcgatcgattattag
DBGET
integrated database retrieval system
