Phycisphaera mikurensis: PSMK_03790
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Entry
PSMK_03790 CDS
T01800
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phm
Phycisphaera mikurensis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phm03032
]
PSMK_03790
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_03790
Enzymes [BR:
phm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSMK_03790
DNA replication proteins [BR:
phm03032
]
Prokaryotic type
DNA Topoisomerases
PSMK_03790
DNA repair and recombination proteins [BR:
phm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSMK_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAM02538
UniProt:
I0IBA0
LinkDB
All DBs
Position
412828..413907
Genome browser
AA seq
359 aa
AA seq
DB search
MASRKKTIPTDVFPEDAALHHADDGAPGYTREKRGRDGHRYLDPAGGPLEDAAALARIEA
LTIPPAWNDVWVCTDAGGHLQATGRDAKKRKVYRYHPRWSERRNQLKFDRLRVFGAALPA
IRARVAADLRRRTLDRDRVAAVAVELLQQTLIRIGNEQYAARNQTFGLTTLRDEHVAATT
GSLRFTFTGKSGRDHDLTVRDRRLAAAALKLSELPGHRLLQYVGDDGRPHALHSEHVNDY
LRDPTGLDFSAKDFRTWFGTVGAACWLLEQDPPLTREEGQKQNVGAIRHAAALLGNTPAT
CRKYYVHPLIPEMNAEGSLGPALRRLVEQMPEEAEAGLHPKEAAVLSLLLGDEGGRGSA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagccgcaagaagacgatcccgactgacgtcttccccgaggacgcggcgctccac
cacgccgacgacggcgcccccggctacacgcgggagaagcggggccgcgacggccaccgc
tacctcgaccccgccggcggcccgctggaggacgccgccgcgctggcccgcatcgaggcg
ctgacgatccccccggcctggaacgacgtctgggtctgcaccgacgccggggggcacctt
caggccaccggccgggacgccaagaagcggaaggtctaccggtaccacccgcggtggagc
gagcggcggaaccagctcaagttcgaccggctgcgcgtcttcggtgccgcgttgcccgcg
atccgcgcccgggtcgcggcggacctgcgccggcgcacgctcgaccgcgaccgcgtcgcc
gccgtggccgtggagctgctgcagcagacactcatccgcatcggcaacgagcagtacgcc
gcccgcaaccagaccttcggcctgacgacgctccgcgacgagcacgtcgccgcgaccacc
ggcagcctccgcttcaccttcaccggcaagagcggccgggaccacgacctcaccgtccgc
gaccgccgcctcgccgcggcggccctcaagctctcggagctgcccgggcaccgcttgctc
cagtacgtcggcgacgacggccggccgcacgcgctgcacagcgagcacgtcaacgactac
ctccgcgatccgacggggctggacttctccgccaaggacttccgcacctggttcggcacg
gtgggggccgcgtgctggctgctcgaacaggaccccccgctgacccgggaagaagggcag
aagcagaacgtgggcgccatccgccacgccgccgcgctgctcggcaacacgccggcgacc
tgccgcaagtactacgtgcacccgctgatccccgagatgaacgccgagggctcgttgggg
ccggcgctccgccggctcgtggagcagatgcccgaggaggccgaagcgggcctgcacccc
aaggaagccgccgtcctgtcgctcctgctcggcgacgagggcggacgcgggtcggcctga
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