Phycisphaera mikurensis: PSMK_04380
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Entry
PSMK_04380 CDS
T01800
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00541
Biosynthesis of various nucleotide sugars
phm01100
Metabolic pathways
phm01250
Biosynthesis of nucleotide sugars
Module
phm_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSMK_04380 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
phm01005
]
PSMK_04380 (kdsB)
Enzymes [BR:
phm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
PSMK_04380 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
phm01005
]
Lipid A
PSMK_04380 (kdsB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
ADH_zinc_N
DUF7252
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BAM02597
UniProt:
I0IBF9
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Position
485396..486232
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AA seq
278 aa
AA seq
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MPPAAPRVLAVLPARFASTRFPGKPLADDTGKPLIRHVVERVAEARSVHRVVVATDDERI
REAVGAFGAEAVMTGEHDNGTSRIAEAVDALEAGGGEPFDVVLNVQGDEPEVPAATIDAL
VMGLIARPDADMATLASVFEPGEDPANTNIVKLVADRRGFAMYFSRSLVPFDRDAERLGR
RPGMTDPARGGGSHPGWTLPGPGPFKHPGLYAYRRAFLRTYASLPPAPLEETEKLEQLRV
LEHGHRIAVVLAAAPHPGIDTPEQYDDFVKRWTAANPA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccgccccccgcgtcctcgccgttctgcccgcccgcttcgcctccacgcgg
ttccccgggaagccgctggcggacgacaccgggaagccgctgatccggcacgtcgtcgag
cgggtggcggaggcgcggagcgtgcaccgcgtggtcgtcgccaccgacgacgaacgcatc
cgcgaggcggtcggggccttcggcgccgaggccgtcatgaccggcgaacacgacaacggg
acctcacggatcgccgaggccgtggacgccctggaagccggcggtggggagcccttcgac
gtcgtgctcaacgtgcagggcgacgagcccgaggtgccggccgccaccatcgacgcgctc
gttatggggctgatcgcccgacccgacgccgacatggccacgctcgccagcgtgttcgag
cccggcgaagacccggccaacacgaacatcgtgaagctcgtcgccgaccgccgcgggttc
gcgatgtacttctcccgcagcctcgtgccctttgaccgcgacgccgaacgcctcggccgc
cgccccggcatgaccgatccggcccggggtggcgggagccaccccggctggacgctgccc
gggcccggccccttcaagcaccccggcctgtacgcctaccgccgcgccttcctccgcacc
tacgcgtcgctcccgccggccccgctcgaggaaaccgagaagctcgagcagctgcgcgtg
ctcgagcacggccaccgcatcgccgtggtcctcgccgccgccccgcaccccggcatcgac
acgcccgagcagtacgacgacttcgtgaagcgttggaccgccgcgaatcccgcttga
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