Phycisphaera mikurensis: PSMK_04450
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Entry
PSMK_04450 CDS
T01800
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phm
Phycisphaera mikurensis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_04450 (phr)
Enzymes [BR:
phm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSMK_04450 (phr)
DNA repair and recombination proteins [BR:
phm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSMK_04450 (phr)
Prokaryotic type
PSMK_04450 (phr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BAM02604
UniProt:
I0IBG6
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All DBs
Position
complement(493891..495312)
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AA seq
473 aa
AA seq
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MPREPSPDIHADRIAALNDAEEKADGAYVLYVMEASMRSRMNHALELAAQHANRLGKRLL
VLYPLVGDTFGAHRRQKHFMLQGVGPLRDKLTARRIRFAVVEGGMAETALRYAEDACRVV
LDAGYLRDHRAWRDEVGNEAEVPVEEVESDVVVPVGTASDKKEHAARTIRPKIHKRLDDF
LVALEPTELEKDATTMGIPDDEVDLSSDAKIGEALDRLGFGEGGVPPVPLFRGGEDAGEE
MLERFLSTANGVYSDHRNQPQTDDVSHMSKYLHFGNLSPIRIALAARDKLSGDDRDDFLE
ELIVRRELTHNFVHFEEDYDKFSQLPAFARETLDEHRDDEREHVYTRQQLEDADTHDPYW
NAAQRELVHTGYMHNYMRMYWGKKILEWTNTPEYGFETTLYLNNKYFLDGRDPNSFANVA
WVYGQHDRGWTEREIFGKVRYMNRNGLERKAKPKAYVEKVDRLVEEAEQRRVG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgagcccagccccgacatccacgccgaccgcatcgccgccctcaacgacgcc
gaggaaaaggcggacggggcttacgtgctgtacgtcatggaggcgtcgatgcggagccgg
atgaaccacgcgctggagctcgctgcgcagcacgccaaccggctgggcaagcggctgctg
gtgctctacccgctggtcggcgacaccttcggcgcccaccgccggcagaagcacttcatg
ctgcagggcgtggggccgctgcgagacaagctgacggcccgccggatccgcttcgcggtg
gtggagggcggcatggcggagacggcgctgcggtacgcggaggatgcgtgccgggtggtg
ctcgacgccggatacctccgcgaccaccgggcgtggcgggacgaggtgggcaacgaggcg
gaagtcccggtggaggaggtcgagagcgacgtggtggtccccgtcggcaccgcgagcgac
aagaaggagcacgccgcccgcacgatccgcccgaagatccacaaacggctcgacgacttt
ctcgtggcgctggagccgacggagctggagaaggacgcgaccacgatggggatccccgac
gacgaggtggacctctccagcgacgcgaagatcggcgaggcgctggaccggctgggcttc
ggtgaaggcggcgtcccgccggtgccgctgttccgcggcggcgaagacgcgggcgaggag
atgctcgagcggttcctctccaccgccaacggcgtctacagcgaccaccgcaaccagccg
cagaccgacgacgtcagccacatgagcaagtacctgcacttcggcaacctctcgccgatc
cgcatcgcgctcgcggcgagggacaagctcagcggcgacgaccgcgacgacttcctggag
gagctgatcgtccgccgcgagctcacgcacaacttcgtgcacttcgaggaggattacgac
aagttctcgcagctgcccgcgttcgcccgggagacgctcgacgagcaccgcgacgacgag
cgtgagcacgtctacacccgccagcaactcgaggacgccgacacgcacgacccgtactgg
aacgccgcgcagagggagctggtccacaccggctacatgcacaactacatgcggatgtac
tggggcaagaagatcctggagtggacgaacacgcccgaatacggcttcgagacgacgctc
tacctcaacaacaagtacttcctcgacgggcgggatcccaactccttcgccaacgtcgcg
tgggtgtacgggcagcacgaccgcggctggaccgaacgcgagatcttcggcaaggtccgc
tacatgaaccgcaacgggctggagcggaaggccaagcccaaggcgtacgtcgagaaggtg
gaccggctggtggaagaggcagagcagcgacgcgtgggttga
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