Phycisphaera mikurensis: PSMK_04900
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Entry
PSMK_04900 CDS
T01800
Name
(GenBank) putative glycoside hydrolase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00052
Galactose metabolism
phm00511
Other glycan degradation
phm00600
Sphingolipid metabolism
phm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PSMK_04900
09103 Lipid metabolism
00600 Sphingolipid metabolism
PSMK_04900
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PSMK_04900
Enzymes [BR:
phm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
PSMK_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro_2_N2
Glyco_hydro_2
LacZ_4
Motif
Other DBs
NCBI-ProteinID:
BAM02649
UniProt:
I0IBL1
LinkDB
All DBs
Position
543911..547180
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AA seq
1089 aa
AA seq
DB search
MPDPFRSLAATLVAGLLALQLPPALAQSTPEPEPDAAPTEGAGNYIEGDPKAALEKDRPQ
PTGVVSVGAAEGGSASGVLSILPPIRLTPRKLSFPHGEDRRVDLNGTWDFVPAVPEGFDG
TFRSIDDWQTLEVPGHPALGGHEVLDPKSDRRFGYHRRFEVPASFEGGRTVLRFEGVDGF
TKIWINGEKVGENDIATLPTELDVTDFVKPGEANELVLTIEGSLVTFWSMRKIGGITREV
YLQHLPDVNLARLHVDTDLTPGSSEGGNGGVLAAMRAHVRVANQGDALASPVTIAFTLRD
ADGEEVALQHLEGPLPLLDVLPGQTLEATLPLHATGVLPWTAETPNLYTLEAELQVDGEP
TMSARQRFGFREVEVAGPHLLVNGSPVKLWATNYHITYPGLSESVPKELIKNDIRLFKEA
NFNAARSRPTPPIQYVDLCDEMGFYTTIEGMISLMIYAKGPLNDHGADPAISVPYRRHIA
TMIESYYSNPSVITWGLANESPYYDYFKVAALGAAAADPTRPLFFGSDARKGVDIPLMDM
NDDHYPRKAYGEGQPSYGIADVDELNTIENGAWDYPADRPNLFTEWLHVHVNNVKEIAYD
PGIDDFWGYPAEVHAKHFDDKPHFAGGFQFKGAPYRGIGASPNWRGVFDEDRRVNDVFWA
VKKSHSPVRIFEPASGRVEGDEAVWPVRNRFAFTNLQDVAFAWASPGGSGEASPSVAPMS
DGELALPAAAARAGPIEVEVLAADGAVLDAYELTLADAAEEEGVAGEASAWRLEEKGRAR
VLTRGDVVATIGAESGLLESVTVGGEPVVIGPVTLSVIPSQLRNFKWQGRFTLVNQAWGW
EAGRVEVDTADDGTVTVSTSGSYTRFDVNFTQAFAPDGTVRVEADATYTGGDNPGEKRGV
NIFNHGIRVPVHQDLDTLFWEREGLWSVYPGDHIGRLEGETRATGDPRWADAREAYDPEA
AKPNPRPWPWSQDLSAGVTRDFRSTKFNLVEGGLAAANGRRIVVIGNRAEAFEDRRHLHA
APLNDDLDGNIFTEEKHGPQKPGYDLSVLSFHNGGTEPHLTKSLRFGEHIARNGWELEAD
AAFRFDAGG
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccggacccgttccgctccctcgccgcgacgctcgtggcgggcctgctcgccctccag
ctccctccggcgctcgcccagtccacgcccgagcccgagcccgacgccgcgcccaccgag
ggcgccggcaactacatcgagggcgatcccaaggcggccctggagaaggaccgcccccaa
cccacaggcgtcgtcagcgtcggcgccgccgagggcggctccgccagcggcgtgctctcg
attctcccgccgatccggctcacgccgcggaaactgtcctttccccacggcgaggaccgc
cgcgtcgacctcaacggcacctgggacttcgtccccgccgtgcccgagggcttcgacggg
accttccgctccatcgacgactggcaaaccctggaggttcccggccaccccgcgctcggg
ggtcacgaggtgctcgatcccaagagcgaccgccgcttcggctaccaccgccgcttcgag
gtgcccgcctccttcgagggcggccggacggtcctccgcttcgagggcgtcgacggcttc
acgaagatctggatcaacggcgagaaggtcggggagaacgacatcgccacgctgcccacc
gagctggacgtcaccgacttcgtgaagcccggcgaggccaacgagctggtgctgaccatc
gagggcagcctggtcaccttctggtccatgcgcaagatcggcggcatcacccgcgaggtc
tacctgcagcacctccccgacgtgaacctcgcccggctgcacgtcgacaccgacctcacc
ccgggttcttcggagggcgggaacgggggcgtgctcgccgcgatgcgggcgcacgtccgc
gtggcgaaccagggcgacgcgctcgcctcgccggtgacgatcgccttcaccctccgcgac
gccgacggcgaggaggtcgccctgcaacacctcgagggcccgctcccgctgctggacgtc
ctgcccgggcagaccctcgaagcgacgctcccgctgcacgcgaccggcgtgctcccctgg
accgccgagacgccgaatctctacacgctcgaggccgagctgcaggtggacggcgagcca
acgatgtccgcccgccagcgcttcggcttccgcgaggtggaggtcgcgggcccgcacctg
ctcgtcaacgggagcccggtgaagctctgggcgaccaactaccacatcacctacccggga
ctctccgagtccgttccgaaggagctgatcaaaaacgacatccgcctcttcaaggaggcc
aacttcaacgcggcccggtcgcggcccacgccgccgatccagtacgtcgacctgtgcgac
gagatgggcttctacaccacgatcgagggcatgatcagcctgatgatctacgcgaagggc
ccgctgaacgaccacggggccgacccggcgatctcggttccgtaccgccggcacatcgcc
acgatgatcgagagctactactccaacccctcggtcatcacctggggcctcgccaacgag
tcgccctactacgactacttcaaggtggcggcgctgggcgccgcggcggcggaccccacc
cgcccgctgttcttcggctccgacgcgcgcaagggcgtcgacatcccgctgatggacatg
aacgacgaccactacccgcgcaaggcctacggcgagggccagcccagctacggcatcgcc
gacgtggacgagctgaacacgatcgagaacggcgcctgggactaccccgccgaccggccc
aacctgttcaccgagtggctgcacgtgcacgtgaacaacgtgaaggagatcgcctacgac
ccgggcatcgacgacttctggggctaccccgccgaggtccacgccaagcacttcgacgac
aagccccacttcgccggcggcttccagttcaagggcgctccctaccgtggcatcggcgcg
agcccgaactggcggggcgtcttcgacgaggaccgccgggtcaacgacgtcttctgggcg
gtcaagaagagccactccccggtgcggatcttcgagccggcctccggtcgggtggagggg
gacgaggcggtgtggccggtgcggaaccgcttcgccttcacgaacctgcaggacgtcgcg
ttcgcgtgggcttcgcccggcggcagcggcgaggcctcgccctcggtggcaccgatgagc
gacggcgagctggcgctgccggcggcggcggcccgcgccgggccgatcgaggtggaggtc
ctcgccgcggacggcgccgtcctggacgcgtacgagctgacgctcgcggatgccgccgag
gaggagggcgtcgcgggggaggcatccgcttggagactcgaagaaaagggccgcgcccgc
gtcctcacccgcggcgacgtggtcgcgacgatcggggcggagtcaggcctgctcgagtcc
gtgaccgtcggcggcgagccggtcgtcatcggcccggtcacgctcagcgtgatcccctcg
cagctgcggaacttcaagtggcagggcaggttcaccctggtgaatcaggcctggggctgg
gaggccggccgcgtggaggtggacaccgccgacgacggcaccgtcaccgtctccacctcc
gggtcctacacccgcttcgacgtcaacttcacgcaggccttcgcgcccgatggcaccgtc
cgcgtcgaggccgacgccacgtacaccggcggcgacaaccccggcgagaagcggggtgtc
aacatcttcaaccacggcatccgcgttcccgtccaccaggacctcgacacgctgttctgg
gaacgcgagggcctctggagcgtgtaccccggcgaccacatcggccggctggagggcgag
acccgcgccaccggcgacccgcggtgggcggacgcccgggaggcttacgaccccgaggcc
gccaagcccaacccgcggccgtggccgtggagccaggacctcagcgccggggtgacgcgg
gacttccgcagcacgaagttcaacctcgtggagggcggactcgcagccgcgaacggccgg
cggatcgtcgtgatcgggaaccgggcggaagccttcgaggatcgccgccacctgcacgcc
gcgccgctcaacgacgacctcgacggcaacatcttcacggaagagaagcacgggccccag
aagccgggttacgacctctccgtgctcagcttccacaacggcggcaccgagccgcacctc
accaagagcctccgcttcggcgagcacatcgccaggaacggctgggagctggaagccgac
gcggccttccgcttcgacgccggcggctga
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