Phycisphaera mikurensis: PSMK_07250
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Entry
PSMK_07250 CDS
T01800
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm03030
DNA replication
phm03410
Base excision repair
phm03420
Nucleotide excision repair
phm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSMK_07250 (polA)
03410 Base excision repair
PSMK_07250 (polA)
03420 Nucleotide excision repair
PSMK_07250 (polA)
03440 Homologous recombination
PSMK_07250 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phm03032
]
PSMK_07250 (polA)
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_07250 (polA)
Enzymes [BR:
phm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSMK_07250 (polA)
DNA replication proteins [BR:
phm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSMK_07250 (polA)
DNA repair and recombination proteins [BR:
phm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSMK_07250 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSMK_07250 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DUF3572
DNA_polI_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
BAM02884
UniProt:
I0IC96
LinkDB
All DBs
Position
complement(812550..815459)
Genome browser
AA seq
969 aa
AA seq
DB search
MPDAKPETVYLIDGHYQFFRAYHAIRGGMTSPVTGEPTGAVFAFTAMLLKFFDTCRPTRA
ALVIDSDEPTFRHALDPAYKGNRIAPPEDFKPQIPVMIEIARGFGLPVLAVPGAEADDIM
ATLADRLTAADPALRVTLVSKDKDLEQVISDRVVLYDVQTQEVRDEPGLLEKKGITPAQA
IDYQALIGDTSDNVPGVEGIGPKTASKLLEKFGDLDGVIAGVPTLKGKQRERLEAAIASG
QLALSKQLVTLMRDVETGFDADDAAVSIDAIDDAALLALFERCGFNGHPRELARLKRTAD
NPEASLGRAKQPDPREEAPAGGLFATPAAEDEPQDDDARYPAFANAGYTCLTSRTAVEQA
VEDARSAGRVAVDTETLGMGHHTGLAGVSMSWKEGEAVYIPVLSPEPDTHLGEAEVIELL
RPLLEDASVAKLGQNFKYDLHVLAHGGVEVQGPVFDSMVAAFLCNAPGLGMDALALAELD
HRCIPIAAVIGEKPRKKADPPQKSIAACDLARVTAYAAEDADVTLRLCNLLEKRCAENGV
LELARNVEMPLVPILFEMERAGILVDPDRLEEQRARLAERADELKAEMEAAVEGASPTPE
GEEPPSLDSPKQLGALLFDRLGFPVQKKTKTGYSTDAEVLEKLSGLAADGALPNVPTAAH
GLPAGMLEYRMLSKLTGTYFAQLQAAAQQLGDSRVHCSFNPTGAATGRLSSSDPNLQNIP
IRTETGKQIRSAFVAPEGMKLIAADYSQVELRVLAHLSEDEALLEAFAENRDVHTAVAAE
VFKVAEAGVTKEQRNAAKTINFGIVYGVTAFGLARRIEGLDNAGAAELIDAYKARYAGID
RFLQQCVTQARDSGFVTTILGRRRVIDGIDSRNPNQRSLAERLAINSVVQGSAADLIKTA
MVDLDRRIRSEDLPLRVLLQVHDELVAEAPAGRADELAGVMREVMSSAMTLRCPLEVEAS
VGADWLEAK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcgaagcccgagaccgtctacctcatcgacggccactaccagttcttccgg
gcctaccacgccatccgcggcggcatgaccagccccgtcaccggcgagccgacgggcgcg
gtgttcgccttcaccgccatgctcctcaagttcttcgacacctgccggccgacgcgggcg
gcgctggtgatcgacagcgacgagcccaccttccgccacgcgctcgacccggcgtacaag
ggcaaccggattgccccgccggaggacttcaagccgcagatccccgtgatgatcgagatc
gctcgggggttcggcctgccggtcctcgccgtgcccggcgccgaggccgacgacatcatg
gccacgctggccgaccggctgacggcggccgaccccgcgctccgcgtcacgctggtcagc
aaggacaaagacctcgagcaggtcatctccgaccgcgtcgtgctctacgacgtgcagacg
caggaggtccgcgacgagccggggctcctggagaagaagggcatcaccccggcccaagcg
atcgactaccaggcgctcatcggcgacaccagcgacaacgtgcccggcgtcgagggcatc
gggcccaagaccgcatcgaagctgctggagaagttcggcgacctcgacggcgtcatcgcc
ggcgtgccgacgctcaagggcaagcagagggagcggctggaggcggcgatcgccagcggc
cagctcgcgctctccaagcagctcgtcacgctgatgcgcgacgtcgagaccggcttcgac
gccgacgacgccgccgtctccatcgacgccatcgacgacgccgccctcctcgcgctcttc
gagcggtgcggcttcaatggccacccgcgcgagctcgcccgcctgaagcggacggccgac
aacccggaagcctccctcggccgagcgaagcagcccgaccccagggaggaggcgccggcg
gggggcctcttcgccacgccggcggccgaggacgaaccgcaggacgacgacgcgaggtac
cccgccttcgccaacgccggctacacctgcttgacgtcgcggaccgcggtcgaacaagcg
gtggaggacgcgcggtccgcgggccgcgtcgcggtcgacaccgagaccctcggcatgggc
caccacaccggcctggcgggcgtctcgatgagctggaaggagggcgaggcggtgtacatc
cccgtcctctcgccagaacccgacacgcacctcggcgaagccgaggtgatcgagttgctc
cgcccgctcctcgaagacgcgtccgtcgccaagctcggccagaacttcaagtacgacctg
cacgtgctcgcccacggcggcgtcgaggtgcaaggcccggtcttcgacagcatggtcgcc
gccttcctgtgcaacgccccggggctggggatggacgcgctcgcgctcgccgagctggac
caccgctgcatccccatcgccgcggtcatcggcgagaagccgcggaagaaggccgacccg
ccccagaagtccatcgccgcgtgcgacctcgctcgggtcaccgcctacgccgccgaagac
gccgacgtcacgctgaggctttgcaacctgctggagaagcgttgcgcggagaacggcgtg
ctggagctggcgaggaacgtcgagatgccgctggtcccgatcctcttcgagatggagcgg
gccggcatcctcgtcgatcccgaccgcctggaggagcagcgggcccgcctcgcggagcgg
gccgacgagctgaaggcggagatggaggcggccgtcgagggagcctcgcccacgcccgag
ggcgaggagccgccgagcctcgacagcccgaagcagctgggcgccctgctcttcgaccgc
ctcggcttccccgtgcagaagaagaccaagaccggctactcgaccgacgccgaggtgctc
gagaagctcagcgggctcgccgccgacggggcgctgccgaacgtcccgaccgccgcccac
ggcctccccgccggaatgctcgagtaccggatgctcagcaagctcaccggcacctacttc
gcccagctgcaggcggccgcgcagcagctcggcgactcccgcgtccactgctccttcaac
cccaccggcgccgccaccggccggctctccagcagcgacccgaacctgcagaacatcccg
atccgcaccgagacgggcaagcagatccgctcggccttcgtcgcgcccgaggggatgaag
ctcatcgccgccgactacagccaggtggagctccgcgtgctggcgcacctctccgaagac
gaagcgctgctggaagccttcgccgagaaccgcgacgtgcacaccgcggtcgccgccgag
gtcttcaaggtggccgaggccggcgtcacgaaagagcagcggaacgccgccaagacgatc
aacttcggcatcgtctacggcgtcaccgccttcggcctcgcccgccggatcgagggcctc
gacaacgccggcgccgccgagctcatcgacgcgtacaaggcccgctacgccggcatcgac
cggttcctgcagcagtgcgtgacgcaggcgcgcgacagcggcttcgtcaccacgatcctc
ggccgccgccgcgtcatcgacggcatcgatagccgcaaccccaaccagcgcagcctcgcc
gagcggctggcgatcaacagcgtcgtgcagggctccgccgcggacctcatcaagacggcg
atggtggacctggaccggcggatccgcagcgaggacctcccgctccgcgtcctgctgcag
gtccacgacgagctcgtcgccgaggcccccgccggccgggccgacgagctcgccggcgtg
atgcgggaggtgatgtcctctgcaatgacgctccgctgcccgctggaagtggaggcgagc
gtgggcgcggactggctcgaggcgaagtga
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