Phycisphaera mikurensis: PSMK_07410
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Entry
PSMK_07410 CDS
T01800
Symbol
holB
Name
(GenBank) putative DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm03030
DNA replication
phm03430
Mismatch repair
phm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSMK_07410 (holB)
03430 Mismatch repair
PSMK_07410 (holB)
03440 Homologous recombination
PSMK_07410 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phm03032
]
PSMK_07410 (holB)
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_07410 (holB)
Enzymes [BR:
phm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSMK_07410 (holB)
DNA replication proteins [BR:
phm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSMK_07410 (holB)
DNA repair and recombination proteins [BR:
phm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSMK_07410 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Motif
Other DBs
NCBI-ProteinID:
BAM02900
UniProt:
I0ICB2
LinkDB
All DBs
Position
complement(832733..833848)
Genome browser
AA seq
371 aa
AA seq
DB search
MPPDPAAENATAAPATLGQPAAAAQLASMLASGRPHHGLIFEGPAGVGKFRSAIGLAWVL
LCLDPPTPASACGVCGSCRRLAGEPEDAGERHPDLHVVTKELSRFSDDASTRNRKLTSIP
VEVLREHLIEPAHRSPQMGPRKVFVLDEAELLNPAGQNVLLKTLEEPPPETFLILVTSSA
DRLLPTVRSRCQRVGFHPLPEAVVEAWVRDHAGDLDAPTRGWVTRFADGSIGRAGLALDR
GLTGWAETLGPLLAAAAAGRAVPDLADAANDAIKGFAESWVKENPQGSKEAANRRAAALL
AHLLAREARDALAAAARGCPADDPIANERRVAAPLRAIEAIDRYQERLDGSVNLSLATAE
LALGYAAAWRG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccggaccccgccgccgagaacgccaccgccgcgccggcgaccctggggcagccc
gcggccgcggcccagctcgcgtcgatgctcgcctccggacggccgcaccacggcctgatc
ttcgaggggccggccggcgtcgggaagttccgctcggcgatcgggctcgcctgggtcctg
ctgtgcctcgacccgccgacccccgcctccgcctgcggcgtctgcggcagctgccgccgg
ctcgccggcgagcccgaggacgccggcgagcggcaccccgacctgcacgtcgtgaccaag
gagctgtcccgcttctccgacgacgcctccacccggaaccgcaagctcacgagcatcccc
gtggaggtgctgcgggagcatctcatcgagcccgctcaccgcagcccgcagatgggcccc
cggaaggtcttcgtgctcgacgaggcggagctgctcaaccccgccggccagaacgtgctg
ctcaagacgctggaggagccgccaccggagaccttcctgattctcgtcacctccagcgcg
gaccggctgctgccgaccgtgcgcagccgctgccagcgggtgggattccacccgctgccc
gaggcggtggtggaggcgtgggtgcgggaccacgcgggggacctggacgcacccacccgc
ggctgggtgacccgcttcgccgacgggagcatcggccgggccgggctggcgctggaccgc
ggcttgaccggctgggccgagacgctgggcccgctgctcgccgccgcggccgccgggcgg
gccgtgccggacctcgccgacgcggcgaacgacgcaatcaagggcttcgcggagtcgtgg
gtgaaggagaacccgcagggcagcaaggaagccgccaaccgccgcgccgccgccctgctc
gcgcacctgctcgcccgcgaagcccgcgacgcgctcgccgccgccgcccgcggctgcccc
gccgacgacccgatcgccaacgagcgaagggtggccgccccgctgcgggcgatcgaggcg
atcgaccggtaccaggagcggctcgacgggagcgtgaacctttcgctggcgacggcggag
cttgcgttgggctacgccgccgcctggcgcggatga
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