Phycisphaera mikurensis: PSMK_09570
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Entry
PSMK_09570 CDS
T01800
Name
(GenBank) putative ribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
phm
Phycisphaera mikurensis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phm03019
]
PSMK_09570
Messenger RNA biogenesis [BR:
phm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSMK_09570
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BAM03116
UniProt:
I0ICX8
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All DBs
Position
complement(1122545..1123528)
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AA seq
327 aa
AA seq
DB search
MPVAEWTANGSIEGVYAANGLGVGQTRAGKDFLKGTLSDKTGRAPMRMWSVDEKKAASLG
SDGFVWVKGKTSVYQGEMQVVLDRIEPAEPNAEDLAQLLPTSNKDVDRMFQDVLGLLATL
ENPAMKCLRDRFLEDQKLMGAFCEAPAAKVMHHAWLGGLLEHTLDLMTAGDRLVGLYPGL
NRDLVLMGLFVHDLGKVEELTWKQGFGYTDAGNLIGHLVGGMSMLDAKIAACADPRLKEE
IGDAAVPVPEKAAMVLRHIVISHHGQPDFGAAKIPSTPEALFVSMLDNLDAKMAMTMQAV
ERDRGNTGFTDRLWALDTRMLREDPLH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtcgccgagtggaccgccaacggaagcatcgagggcgtgtacgccgccaacggc
ctgggcgtcggccagacccgcgccggcaaggacttcctcaagggcacgctctcggacaag
accggccgggcccccatgcggatgtggtccgtcgacgagaagaaggccgcatcgctgggc
agcgacggcttcgtgtgggtcaagggcaagaccagcgtctaccagggcgagatgcaggtc
gtgctcgaccgcatcgagcccgccgagcccaacgccgaggacctcgcccagctgctgccg
acctcgaacaaggacgtcgatcggatgttccaggacgtgctgggcctgctcgccacgctc
gagaacccggcgatgaagtgcctgcgtgaccgcttcttggaggatcagaagctgatgggc
gccttctgcgaggcgcccgcggcgaaggtgatgcaccacgcctggctcggcggcctgctc
gagcacacgctggacctgatgaccgccggcgaccggctcgtcgggctgtaccccggcctc
aaccgcgacctcgtgctcatgggcctcttcgtccacgacctgggcaaggtcgaggagctg
acctggaagcagggcttcggctacaccgacgcgggcaacctgatcggccacctcgtcggc
ggcatgtcgatgctcgacgcgaagatcgccgcctgcgccgatccgcggctcaaggaggag
atcggcgacgccgcggtgccggtcccggagaaggccgccatggtgctgcgccacatcgtc
atctcgcaccacggccagccggacttcggcgccgcgaagatcccctcgacgccggaggcc
ctcttcgtctcgatgctcgacaacctcgacgcgaagatggcgatgacgatgcaggccgtg
gagcgggacaggggcaacaccggcttcaccgaccgcctgtgggcgctcgacacccggatg
ctccgcgaagaccccctgcactga
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