Phycisphaera mikurensis: PSMK_12460
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Entry
PSMK_12460 CDS
T01800
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSMK_12460 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phm01007
]
PSMK_12460 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phm03016
]
PSMK_12460 (lysS)
Enzymes [BR:
phm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PSMK_12460 (lysS)
Amino acid related enzymes [BR:
phm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PSMK_12460 (lysS)
Transfer RNA biogenesis [BR:
phm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PSMK_12460 (lysS)
Prokaryotic type
Other AARSs
PSMK_12460 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAM03405
UniProt:
I0IDR7
LinkDB
All DBs
Position
complement(1467723..1469405)
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AA seq
560 aa
AA seq
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MNPDPPRTAPPPNASSASTEELLAARRAKLDKLRSEHGIDPFGTRQDGLVSLAAARALYD
AEADRWFKEDPASGDDRPIVAVAGRVVQQRLMGNLLFLSLRDHSGVDLQVAVSKKAVGPE
AFKVAKLVDLADLVAARGPLAQTKTGEVTVWAGPGGDPSADPDASSVGIEHREDPTGGLT
FRLLTKSLALPPGKFHGLTDPEQRYRRRHVDLWSNPEGLATLQTRSRLIKATRDFFEGRG
FLEVETPMMQPVPGGAAARPFVTHHNALDLELFLRIAPELYLKRLLVGGLPRVFEINRNF
RNEGVDRSHNPEFTMLELYEAYGDLESILHHTQGLVEHLAGEVLGSLKRPYGDHEIDFGA
FRRASYHDLFAEHNGWDARGEKGAARVLAKARALGLQTGGVHPDVLLNALWEETVEKHLI
QPTFVVEYPASLCPLTKRKPDDPTIAERFELFVAGMELANAYTELNDPDVQEANFREQLG
GDAEENTFRNLDLDFLDALKVGMPPAGGLGIGIDRLVMLLTNKSSIRDVLAFPLMKPVGT
HPLRGSSEEAEKRRSEEVSK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaccccccgagaaccgctccgccgcccaacgcctcctccgcttccaccgag
gagctgctggccgcccggcgggccaagctcgacaagctccggagcgagcacgggatcgac
cccttcggcacgcggcaggacgggctcgtctcgctcgccgccgcccgggcgctgtacgac
gccgaggccgatcgctggttcaaggaggatcccgcctccggcgacgaccggccgatcgtc
gccgtcgcgggccgcgtggtgcagcagcggctgatgggcaacctgctcttcctgtcgctg
cgggaccactccggggtggacctgcaggtggcggtctcgaagaaggcggtcgggccggag
gccttcaaggtcgcgaagctggtcgacctcgcggacctcgtcgcggcgcggggtccgctg
gcgcagaccaagaccggcgaggtgacggtctgggccgggcccggcggcgacccctccgcc
gatccggacgcgtcctccgtcggcatcgagcaccgggaggaccccaccggcgggctcacc
ttccgcctgctcaccaagagcctcgcgctcccgccgggcaagttccacggcctcaccgat
cccgagcagcggtaccggcgccggcacgtcgacctctggagcaaccccgagggcctcgcg
acgctgcagacgcggtcgaggctcatcaaggcgacccgcgacttcttcgagggccgcggc
ttcctcgaggtcgagaccccgatgatgcagcccgtgcccggcggcgccgcggcccggccc
ttcgtcacccaccacaacgcgctggacctggagctgttcctgcggatcgccccggagctg
tacctcaagcgcctgctcgtgggcggcctgccgagggtcttcgagatcaaccgcaacttc
cgcaacgagggcgtggaccgcagccacaaccccgagttcacgatgctcgagctctacgag
gcctacggcgacctcgaaagcatcctccaccacacccagggcctcgtcgagcacctcgcc
ggcgaggtgctcggctcgctgaagcggccctacggcgaccacgagatcgacttcggcgcc
ttccgccgggcgagctaccacgacctcttcgccgagcacaacggctgggacgcccgcggc
gagaagggcgccgcccgcgtcctggccaaggccagagccctgggcctgcagaccggcggc
gtccaccccgacgtgctgctcaacgcgctgtgggaggagaccgtcgagaagcacctcatc
cagccgaccttcgtcgtggagtaccccgccagcctgtgcccgctgacgaagcggaagccc
gacgacccgacgatcgccgagcgcttcgagctgttcgtcgccggcatggagctcgccaac
gcctacaccgagctcaacgaccccgacgtgcaggaagcgaacttccgcgagcagctcggc
ggcgatgcggaggagaacaccttccgcaacctggacctggacttcctcgacgccctgaag
gtcggcatgccgcccgccggcggcctgggcatcggcatcgaccgcctggtgatgctgctg
acgaacaagagctcgatccgggatgtactggcgtttccgctgatgaagccggtggggacg
catccgctgcgcggatcgagcgaggaagcggagaagcgaagaagcgaagaagtcagcaag
tga
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