Phycisphaera mikurensis: PSMK_16120
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Entry
PSMK_16120 CDS
T01800
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00541
Biosynthesis of various nucleotide sugars
phm01100
Metabolic pathways
phm01250
Biosynthesis of nucleotide sugars
Module
phm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSMK_16120 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
phm01005
]
PSMK_16120 (kdsA)
Enzymes [BR:
phm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PSMK_16120 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
phm01005
]
Lipid A
PSMK_16120 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAM03771
UniProt:
I0IET3
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All DBs
Position
complement(1898101..1898937)
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AA seq
278 aa
AA seq
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MKPLELGPAVSVTADGPLTILAGPCQAESYELCVRVGEALRDACEKLGLGYVFKASFDKA
NRTSAAGRRGPGVEAGLELLARAKAALGVPLTTDVHLPDQPTLAVQAGVDLLQVPAFLCR
QTDLLAACAATPAAVNVKKGQFLSPAEMGQVVEKVTRCRPDAPRVMVTDRGTFFGYHRLV
NDFAGVGDLIDLGVPVCFDATHSVQQPGAAAGGTATGGRRERAPLLARCAVAAGVHALFL
ETHPDPDAAASDAAVMLPLEKTLELLPALQRLHDAARG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcttgaactcggtcctgccgtctccgtcaccgccgacggaccgctcacgatc
ctcgccggcccctgccaggcggagagctacgagctgtgcgttcgcgtgggggaggcgttg
cgggacgcgtgcgagaagctcgggctggggtacgtcttcaaggcgtcgttcgacaaggcg
aaccggacctcggcggcgggccgccgcgggcccggcgtggaggcggggctggagctgctg
gcgagggcgaaggcggcgctgggcgtgccgctcacgaccgacgtgcacctgccggaccag
ccgacgctcgcggtccaggcgggcgtcgacctgctgcaggtgcccgccttcctgtgccgg
cagaccgacctgctcgcggcgtgcgccgcgacccccgccgcggtgaacgtcaagaaaggc
cagtttctttcgcccgcggagatggggcaggtggtggagaaggtcacgcggtgcaggccg
gacgcgccgcgcgtcatggtcaccgaccgggggaccttcttcggctaccaccgcctcgtg
aacgacttcgccggcgtcggcgacctgatcgacctcggcgtgccggtgtgcttcgacgcg
acgcactcggtgcagcaacccggcgccgcggcgggcggcacggccaccggcggccgccgc
gagcgggcgcccctgctggcgcggtgcgccgtggcggcgggagtgcacgcgctcttcctc
gagacgcaccccgacccggacgcggcggcgagcgatgcggcggtgatgctgccgctggag
aagacgctcgagctgctgcccgcgctccagcggctgcacgacgcggcgcgtggctga
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