Phycisphaera mikurensis: PSMK_16820
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Entry
PSMK_16820 CDS
T01800
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm03420
Nucleotide excision repair
phm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSMK_16820 (pcrA)
03430 Mismatch repair
PSMK_16820 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_16820 (pcrA)
Enzymes [BR:
phm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSMK_16820 (pcrA)
DNA repair and recombination proteins [BR:
phm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSMK_16820 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
PSMK_16820 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAM03841
UniProt:
I0IF03
LinkDB
All DBs
Position
complement(1981788..1984196)
Genome browser
AA seq
802 aa
AA seq
DB search
MPDAADVLPDFLSDEAHPKAAAAAPPEPATFKEASAGYRSAGVDHAAELTEGLTEPQAEA
VAHVDGPLLVLAGPGSGKTRVITRRVAYLVRACGVPPWHVLAITFTNKAAGEMRERVAQL
LTEKQARAATVSTFHALCARLIRQHAERVGLPPGYSIYDTADQKAAIKTALSELEINPKN
FAPASMLAGISNAKNELLTPAAYQATASDFHKRTVAKVYAKYQQILVRNSAVDFDDLLMK
TVELCSNHPDVLAELQDRFRYILVDEYQDTNRAQFMIADFLAKSHHNLMVTGDPDQSIYG
WRGADIRNILDFETGYAEAKTIRLEQNYRSTKTILAAADALIANNARRKAKRLFTDNDDG
GPVVVTKTYDQDQEAQFLAERLKHHHDAGTPWSDMAVFYRINSLSRSLEDALRDGAIPYQ
IARGTAFYDRKEVKDALAFLRAIANPADEVTHFRIINTPARGISAASVKAIRAHTLATDQ
PLNGALADPEKIAGLNNRAQVAVAKFHAMLEGWRQRAGLVATPGEGLLVPRRDADPSEQG
SLADLVRDVIDRSGLDAFYRNDKSDPDQERLANLGELVTSVTQFEEQMELDRLEDDPDAE
VPGLGEKLLGFLERVALVADADSIDAADGSVTLMTLHAAKGLEFPVVGMIALEDGLLPHQ
RAAEDEDEMEEERRLAFVGITRAERHLYLTSTKYRTVFGRTNPTVPSRFLDELPESAVER
RDIADDALDGGGFTHRRGQAQRNRADREADAWPPGTEVRHPQFGRGRIRKVDSMGAHTRA
SVEFQTHGLKTMILQYARLERV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgccgccgatgttctgccggacttcctgtccgacgaggcccacccgaaggcc
gcggccgccgctccgcccgagccggcgacgttcaaggaggcgagcgccggctaccggtcc
gccggcgtcgaccacgcggcggagctgaccgaggggctgaccgagccgcaggccgaggcg
gtggcgcacgtggacgggccgctcttggtgctcgcggggccggggtcgggcaagacgcgg
gtgatcacgcggcgggtggcgtacctggtgcgggcctgcggcgtgccgccgtggcacgtg
ctggcgatcacgttcacgaacaaggccgccggcgagatgcgcgagcgggtggcgcagctg
cttaccgagaagcaggcccgggcggcgacggtctcgaccttccacgccctgtgcgcgcga
ctcatccgccagcacgccgagcgggtggggctgccgccgggctactcgatctacgacacg
gccgaccagaaggcggcgatcaagaccgcgctgtccgagctggagatcaacccgaagaac
ttcgcccccgcctcgatgctcgcgggcatctccaacgccaagaacgagctgctcacgccc
gcggcgtaccaggccaccgccagcgacttccacaagcggacggtcgcgaaggtctacgcc
aagtaccagcagatcctggtgcgcaactcggcggtcgacttcgacgacctgctgatgaag
accgtcgagctgtgctccaaccaccctgacgtcctcgccgagctgcaggaccgcttccgc
tacatcctcgtcgacgagtaccaggacacgaaccgggcccagttcatgatcgccgacttc
ctcgcgaagtcgcaccacaacctgatggtcaccggcgacccggatcaatccatctacggg
tggcgcggcgcggacatccgcaacatcctcgacttcgagaccggctacgccgaggccaag
acgatccggctggagcagaactaccgctccacgaagacgatcctcgccgcggcggatgcg
ctcatcgcgaacaacgcacgccggaaggccaagcggctgttcaccgacaacgacgacggc
ggaccggtggtcgtcaccaagacctacgaccaggaccaggaggcgcagttccttgcagag
cggctcaagcaccaccacgacgccggcacgccctggtcggacatggcggtcttctaccgc
atcaactcgctgtcgcgctcgctggaggacgcgctgcgcgacggcgcgatcccgtaccag
atcgcccgcggcacggccttctacgaccgcaaggaggtgaaggacgcgctggccttcctc
cgcgcgatcgccaaccccgccgacgaggtgacgcacttccggatcatcaacacgcccgcc
cgggggatctccgccgcgagcgtgaaagcgatccgggcgcacaccctcgcgacggaccag
ccgctgaacggagccctcgccgatcccgagaagatcgccgggctgaacaaccgggcgcag
gtcgcggtcgcgaagttccacgcgatgctcgagggctggcggcagcgggcggggctggtg
gccacgccgggcgaagggctcctggtccccagacgcgacgcggaccccagcgagcagggc
tcgctcgccgatctggtccgcgacgtgatcgaccgctccgggctcgacgccttctaccgc
aacgacaagagcgaccccgaccaggagcggctggccaacctcggcgagctggtgaccagc
gtcacgcagttcgaggagcagatggagctggaccggctcgaggacgaccccgacgcggaa
gtgcccggcctcggcgagaagctgctcggcttcctggagcgcgtcgcgctggttgccgac
gccgactcgatcgacgccgccgacggcagcgtcacgctgatgaccctccacgccgcgaag
gggctcgagttcccggtcgtcggcatgatcgcactcgaggacggcctgctcccgcaccag
cgggccgccgaggacgaggacgagatggaggaggagcggcgcctcgccttcgtggggatc
acgcgggccgagcggcacctgtacctgacctcgacgaagtaccgcaccgtcttcggccgg
acgaacccgacggtgcccagccgcttcctcgacgagttgcccgagtcagcggtggagcgc
agggacatcgctgacgatgctttggacggcgggggcttcacgcaccgacgcgggcaggcg
cagcggaaccgggccgaccgggaggcggacgcgtggcccccgggcaccgaggtccgccac
ccgcagttcgggcgcgggcggatccgcaaggtcgactcgatgggtgcgcacacgcgggcg
agcgtcgagttccagacgcacgggctcaagacgatgatcctgcagtacgcgagattggag
cgggtttga
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