Phycisphaera mikurensis: PSMK_19170
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Entry
PSMK_19170 CDS
T01800
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
phm
Phycisphaera mikurensis
Pathway
phm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSMK_19170 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_19170 (uvrB)
DNA repair and recombination proteins [BR:
phm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSMK_19170 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSMK_19170 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
Kinesin
AAA_16
AAA_30
AAA_19
AAA_5
AAA_7
AAA_25
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BAM04076
UniProt:
I0IFN8
LinkDB
All DBs
Position
2264496..2266826
Genome browser
AA seq
776 aa
AA seq
DB search
MPTDSETDEEEAIDDSGFFKGRDGGGVTPSAAHRDRPFRLDSAFKPMGDQPTAIASLVER
ISSGERFSTLLGATGTGKTFTMAHTIEKLQRPTLIISHNKTLAAQLYEEMKELFPDNAVS
YFVSYYDYYQPEAYIPQRDIYIEKDSSRNDDLDRLRLAATSALVSRRDVIVVASVSCIFG
LGSPDEYKKHVVALNVGQSIKRRDLLRSFADMQYSRSEYDLKRASFRVRGDVIEIVPAGE
EYAVRIEMFGDEIESLNLVNPLTGELLADERAVFIYPAVNYVLPEDEQSRAISAIKEELD
ERVAELRSEGKLLEAQRLLARTKYDLEQLEELGFCNGIENYSRHLDGRPAGSMPYTLLDY
FPDSTRGMYTGGFEERGPDGEKPEGRNPSMADRVHERPDGTVWTGPAGEASAGDWLMIID
ESHVTLPQLHAMYHGDRHRKETLVEHGFRLPSAMDNRPLTYDEIEKKWPQVVFVSATPGA
YELEKSGGEVAEQVIRPTGLLDPVIEVHPAEGQVPDLLERARKRVAAGERILVTTLTKRL
AEDLASYLAKNDIKCRYLHSDIETLDRVVLLRELREGDFDVLVGVNLLREGLDLPEVSLV
CIMDADKEGFLRSGRSLIQQIGRAARNQNAYVVMYADEVTPSMAEAMEETERRREKQLAY
NAEHGITPRTIKKAIRRGIENELRARKTAREAATPEGKEYDREELLGELQKAMMEAAQNL
DFEKAAALRDKIKEVKEAPNLGKITLTRGEAAAVKPGTPGTKVKKKKKKNAKKREG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgactccgagaccgacgaggaggaagccatcgacgactccggcttcttcaaa
ggccgcgacggcggcggagtcaccccctccgccgcccaccgcgaccggcccttccggctc
gacagcgcgttcaagcccatgggcgaccagcccacggcgatcgcgtcgctggtcgagcgg
atctcttcgggcgagcgcttctccacgctgctgggcgccaccggcaccggcaagaccttc
acgatggcccacaccatcgagaagctccagcgccccacgctgatcatcagccacaacaag
accctcgccgcccagctctacgaggagatgaaggagctgttccccgacaacgcggtcagc
tacttcgtcagctactacgactactaccagcccgaggcgtacatcccccagcgggacatc
tacatcgagaaggactcgtcccgcaacgacgacctggaccgcctccgcctggcggccacc
tcggcgctggtctcccgccgcgacgtgatcgtcgtcgccagcgtctcgtgcatcttcggc
ctcggctcgccggacgagtacaagaagcacgtcgtcgcgctcaacgtcgggcagtcgatc
aagcggcgcgacctcctgcggtccttcgccgacatgcagtacagccgcagcgagtacgac
ctcaagcgggcgagcttccgcgtgcgcggcgacgtgatcgagatcgtccccgccggcgag
gagtacgccgtgcggatcgagatgttcggcgacgagatcgagagcctgaacctcgtgaac
ccgctcaccggcgagctgctcgccgacgagcgggcggtcttcatctaccccgcggtgaac
tacgtgctgcccgaggacgagcagagccgggcgatctcggcgatcaaggaggaactcgac
gaacgcgtcgccgagctgcgcagcgagggcaagctgctggaggcccagcgcctgctcgcc
cgcaccaagtacgacctcgagcagctcgaggagctgggcttctgcaacggcatcgagaac
tacagccgccacctcgacggccgccccgccggcagcatgccgtacacgctgctggactac
ttccccgactccacgcgcggcatgtacaccggcggcttcgaggagcgtggccccgacggc
gaaaaaccggaaggccgcaacccgagcatggccgatcgcgtgcacgagcggcccgacggc
accgtgtggaccggccccgccggcgaggcctccgcgggcgactggctgatgatcatcgac
gagagccacgtcaccctgccgcagctgcacgcgatgtaccacggcgaccggcaccgcaag
gagaccctcgtcgagcacggcttccgcctgccctcggcgatggacaaccggccgctgacc
tacgacgagatcgagaagaagtggccgcaggtcgtcttcgtctccgccacccccggtgcg
tacgagctggagaagtccggcggcgaggtcgccgagcaggtcatccgcccgaccggcctg
ctggacccggtcatcgaggtgcaccccgccgagggccaggtgcccgacctgctcgaacgg
gcccgcaagcgggtcgccgccggcgagcggatcctggtcaccacgctcacgaagcggctg
gcggaggacctcgccagctacctcgcgaagaacgacatcaagtgccgctacctgcacagc
gacatcgagacgctcgaccgcgtcgtgctgctccgcgagctgcgcgagggcgacttcgac
gtgctcgtcggcgtgaacctgctgcgcgaggggctggacctccccgaggtgtctctcgtg
tgcatcatggacgccgacaaggagggcttcctccgctcgggccgctcgctcatccagcag
atcggccgggcggcccgcaaccagaacgcgtacgtggtgatgtacgccgacgaggtcacg
ccgagcatggccgaggcgatggaggagaccgagcggcgccgcgagaagcagctggcgtac
aacgccgagcacggcatcacgcccagaacgatcaagaaggcgatccgccgcggcatcgag
aacgagctgcgcgcccgcaagaccgcccgcgaggccgccacccccgagggcaaggaatac
gaccgcgaggagctgctcggcgagctccagaaggcgatgatggaggccgcccagaacctc
gacttcgagaaggccgccgccctccgcgacaagatcaaggaggtgaaggaggccccgaac
ctcggcaagatcacgctgaccaggggcgaagccgccgccgtgaagcccggcacgccgggg
acgaaggtgaagaagaaaaagaagaagaacgcgaagaagcgggagggctga
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