Phycisphaera mikurensis: PSMK_22250
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Entry
PSMK_22250 CDS
T01800
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSMK_22250 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phm01007
]
PSMK_22250 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phm03016
]
PSMK_22250 (aspS)
03029 Mitochondrial biogenesis [BR:
phm03029
]
PSMK_22250 (aspS)
Enzymes [BR:
phm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PSMK_22250 (aspS)
Amino acid related enzymes [BR:
phm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PSMK_22250 (aspS)
Transfer RNA biogenesis [BR:
phm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PSMK_22250 (aspS)
Prokaryotic type
Other AARSs
PSMK_22250 (aspS)
Mitochondrial biogenesis [BR:
phm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PSMK_22250 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BAM04384
UniProt:
I0IGJ6
LinkDB
All DBs
Position
2626727..2628595
Genome browser
AA seq
622 aa
AA seq
DB search
MSSTYRTHSCGALRPADSGSTVTLSGWVNNYRDHGGVRFVDLRDRDGLTQVVFHPEAAAA
HQTAQKLRHEDVITVTGEVVAREGGVNPKLATGEVEVDASALRVLSKSLTPPFTPDEAGK
VNEEIRLRHRYLDMRRPRMQEILRKRHRVTKTVRDFCDEHGFLEIETPFLCRSTPEGARD
FLVPSRLQAGSFYALPQSPQLFKQLLMIGGAERYVQIVRCFRDEDPRADRQAEFTQVDLE
MSFVDQEDVIGLCEGMIRRIWKDVAGVDVPTIQRMPYAEAMARFGSDRPDLRFGMELVDV
TQTCRSTGFKVFDGAVAAGGAVKLIRVPGGGSLTRKQTDALADFAKGFGGGGLPVCKVED
AGGTLQLATGVAKFLGGVGPRLIDAAGAEAGDLLCFGVDPKPATVDRVLGELRVKLAHDL
GLIDPEQNAWVWIVDFPLVEWLEEPAGLRAAVADGAGQSGSAAASAPGRWHALHHPFTAP
AEGSAEALKSGDRERIAAVTSKAYDLVLNGSELGGGSIRVHAPETQATIFELLGIHPEEQ
RNKFGFLLDALQHGAPPHGGLAFGLDRVVMHLVGTTNIRDVIAFPKTQNGADLLTDAPSE
VEDKQLEELSLVVRRAAAAATA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgacctaccgaacgcactcctgcggggccctccgccccgccgactccggctcc
accgtcaccctctcggggtgggtgaacaactaccgcgaccacggcggggtgcgcttcgtg
gacctccgcgaccgcgacggcctgacccaggtcgtcttccaccccgaggccgccgccgct
caccaaacggcccagaagctgcggcacgaggacgtcatcaccgtgaccggcgaggtggtg
gcccgcgagggcggcgtcaacccgaagctggcgaccggggaggtcgaggtggacgcgtcg
gcgttgagggtcctcagcaagagcctcacgccgccgttcacccccgacgaagccggcaag
gtcaacgaggagatccgcctccgccaccgctacctcgacatgcgccgcccgcggatgcag
gagattctgcggaagcggcaccgcgtcaccaagaccgtccgcgacttctgcgacgagcac
ggcttcctggagatcgagacccctttcctgtgccggtccacccccgagggtgcccgcgac
ttcctggtcccctcgcgtctccaggccggcagcttctacgcgctcccgcagagcccgcag
ctcttcaagcagctgctgatgatcggcggcgccgagcggtacgtgcagatcgtccgctgc
ttccgcgacgaggacccgcgagccgaccgccaggcggagttcacgcaggtcgacctggag
atgagcttcgtcgaccaggaggacgtcatcggcctctgcgagggcatgatccgccgcatc
tggaaggacgtcgccggcgtcgacgtgcccacgatccagcgcatgccctacgccgaggcg
atggcccgcttcggcagcgaccggcccgacctgcgcttcggcatggagctggtggacgtg
acccagacgtgccgctcgaccggcttcaaggtcttcgacggcgccgtcgccgccggtggc
gcggtgaagctgatccgggtgcccggcggcggctcgctcacgcggaagcagaccgacgcg
ctcgcggacttcgcgaagggcttcggcggcggcgggctcccggtgtgcaaggtggaggac
gcaggcgggacgctccagctcgccaccggcgtcgccaagttcctcgggggcgtcggcccg
cggctgatcgatgcggccggggccgaggccggcgacctcctgtgcttcggcgtcgacccc
aagcccgccacggtcgaccgcgtgctcggcgagctccgcgtgaagctcgcccacgacctc
gggctgatcgacccggagcagaacgcctgggtctggatcgtcgacttcccgctcgtggag
tggctcgaagagcccgccgggctccgggccgccgtcgccgacggagcgggccagtccgga
tcggccgcggcctcggcgcccggccgctggcacgcgctgcaccacccgttcacggcgccc
gcggagggctcggcggaggcgctcaagagcggcgatcgcgagcggatcgccgccgtcacc
agcaaggcctacgacctcgtgctcaacggcagcgagctcggcggtggcagcatccgcgtg
cacgcgcccgagacgcaagccacgatcttcgagctgctgggcatccaccccgaggagcag
cggaacaagttcggcttcctcctcgacgcgctccagcacggcgctccgccgcacggcggc
ctcgccttcggcctcgaccgcgtggtgatgcacctggtcggcaccaccaacatccgcgac
gtcatcgccttccccaagacgcagaacggggcggacctgctgaccgacgcgccctcggag
gtggaggacaagcagctcgaggagctgtcgttggtggtgcggagggcggcggccgcggca
accgcttga
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