Phycisphaera mikurensis: PSMK_22790
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Entry
PSMK_22790 CDS
T01800
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
phm
Phycisphaera mikurensis
Pathway
phm02020
Two-component system
phm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSMK_22790 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSMK_22790 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phm03021
]
PSMK_22790 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
phm02035
]
PSMK_22790 (fliA)
Transcription machinery [BR:
phm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSMK_22790 (fliA)
Bacterial motility proteins [BR:
phm02035
]
Flagellar system
Flagellar assembly proteins
Stator
PSMK_22790 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
MarR_2
HTH_23
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
BAM04438
UniProt:
I0IGQ0
LinkDB
All DBs
Position
complement(2702877..2703692)
Genome browser
AA seq
271 aa
AA seq
DB search
MALRTRTRTPRIKPTPEQEEATRKIWVRYEKKPSDALRNDLMERYLPLVRYNAERVHTKL
PDEVDVDDLMSAGVFGLKDAIEAFDLGRGVKFETYCAPRIRGAILDELRSMDWVPRLVRS
RSSQVDKARRSLEMQTGVKPTDDEIIEELGVDEEEFVKIKRDSSAVGMVSLSRKWFESDS
SKDVREIDVLADTRQANPFKEVQKSDLKQLITKGLSRAERLIVILYYFEEMTMKEIGATL
DLSESRVSQMHSSILARLKAQLSHRERELED
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggctctccgcacccggacacgcacgccccgcatcaagcccacgcccgagcaggaggaa
gcgacccgcaagatctgggtgcggtacgagaagaagccttccgacgcgctccgcaacgac
ctgatggagcgttacctgccgctggtgcgctacaacgccgagcgggtccacacgaagctg
cccgacgaggtcgacgtcgacgacctgatgtccgcgggggtcttcggcctcaaggacgcc
atcgaggccttcgacctggggcggggcgtcaagttcgagacctactgcgccccgcgcatc
cgcggcgcgatcctcgacgagctccgctcgatggactgggtcccgcggctggtccgctcc
cgcagcagccaggtggacaaggcgcgtcgctcgctggagatgcagaccggcgtgaagccg
accgacgacgagatcatcgaggagctcggggtggacgaggaggagttcgtcaagatcaag
cgggacagctcggccgtcgggatggtctcgctgtctcggaagtggttcgaaagcgattcc
agcaaggacgtccgggagatcgacgtgctggcggacacgcggcaggcgaatcccttcaag
gaggtccagaagagcgacctcaagcagctgatcaccaaggggctctcgcgtgccgagcgg
ctgatcgtcatcctttactacttcgaggagatgacgatgaaggagatcggcgcgacgctg
gacctctccgagagccgcgtcagccagatgcactcgagcatcctcgcccgcctgaaggcc
cagctctcgcaccgcgagcgcgaactcgaagactga
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