Phycisphaera mikurensis: PSMK_23170
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Entry
PSMK_23170 CDS
T01800
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
phm
Phycisphaera mikurensis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phm03019
]
PSMK_23170 (rnc)
03009 Ribosome biogenesis [BR:
phm03009
]
PSMK_23170 (rnc)
03036 Chromosome and associated proteins [BR:
phm03036
]
PSMK_23170 (rnc)
Enzymes [BR:
phm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PSMK_23170 (rnc)
Messenger RNA biogenesis [BR:
phm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSMK_23170 (rnc)
Ribosome biogenesis [BR:
phm03009
]
Eukaryotic type
90S particles
RNase
PSMK_23170 (rnc)
Prokaryotic type
rRNA processing factors
PSMK_23170 (rnc)
Chromosome and associated proteins [BR:
phm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PSMK_23170 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BAM04476
UniProt:
I0IGT8
LinkDB
All DBs
Position
complement(2747940..2748704)
Genome browser
AA seq
254 aa
AA seq
DB search
MSESAPRPAASDADRIERAQAALGHRFADAGLLAEALRHASAAGPGRPSNERLEFLGDAV
IELCVCEALFERFPDRPEGELSVMKSAVVSRVACAAAADRLGLVALLQLGPGMRARARLA
DTLGGNAFEAVVAALHLDAGLPTARAFVLDHLGDALEEAATSTHQRNFKSALQDFAQAHL
GGRALYEPLGSSGPGHRPVFRVAAVVAGRRFGEASASTKKGAEQAAAEAALHAMRAEPGD
LPPLARAQLDALLG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagtcagcgccccggcccgcagcttccgacgccgaccgaatcgaacgcgcgcag
gccgcgctcggccaccgcttcgccgacgccgggctcctcgcggaggcgctgcgccacgcg
tcggccgccggccccggccggccctccaacgagcgtctggagttcctcggcgacgccgtc
atcgagctgtgcgtctgcgaggcgctcttcgagcgcttccccgaccgccccgagggcgag
ctgtcggtgatgaagtccgccgtggtctcgcgtgtcgcctgcgccgccgccgccgatcgg
ctcggcctcgtcgccctgctgcagctgggtccgggcatgcgggcccgggcgcggctggcc
gacacgctcggcggcaacgccttcgaggccgtcgtcgccgccctgcacctcgacgccggc
ctgcccaccgcccgcgccttcgtgctcgatcacctcggcgacgccctcgaggaggccgcc
acctccacccaccagcggaacttcaagagcgcgctgcaggacttcgcccaggcccacctc
ggcgggcgtgcgctctacgagccgctcggctccagcggcccgggccaccgccccgtcttc
cgcgtcgccgcggtggtggccggtcgccgcttcggggaggcttccgcctcgacgaagaaa
ggagccgagcaagcggccgccgaagccgctctgcacgcgatgcgggcggagccgggcgac
ctgcccccgctggcccgcgcccagctcgacgcgttgctcggctag
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