Phycisphaera mikurensis: PSMK_23660
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Entry
PSMK_23660 CDS
T01800
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00260
Glycine, serine and threonine metabolism
phm00630
Glyoxylate and dicarboxylate metabolism
phm00670
One carbon pool by folate
phm00785
Lipoic acid metabolism
phm01100
Metabolic pathways
phm01110
Biosynthesis of secondary metabolites
phm01200
Carbon metabolism
Module
phm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSMK_23660 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSMK_23660 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PSMK_23660 (gcvP)
00670 One carbon pool by folate
PSMK_23660 (gcvP)
Enzymes [BR:
phm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PSMK_23660 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAM04525
UniProt:
I0IGY7
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All DBs
Position
2807150..2810131
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AA seq
993 aa
AA seq
DB search
MPDAATATRPASCATGFADRHHGQRPEDTAAMLAAVGAESVEALIERTVPEAIRVREPLD
VPAARSEAEALAEVRAIADRNEVVPSLLGCGYHGTHTPPVILRNVLENPLWYTPYTPYQA
EIAQGRLEGLLNFQTAISDLTGLPVAGASLLDEATAAAEAMAMCHGQARGKKARFLADAG
CHPQTLAVLETRARGLGIELVVTDAVAEAAEALAAEDVSGVLVQNPTTDGRLIPADTLEK
LAARTHEHGALLVAAADPLSLLLLPGPGQWGADVAVGSAQRFGVPLGFGGPHPAYLATRE
QLARKMPGRLIGVSRDARGRPALRMAIQTREQHIKRDRATSNICTAQALLANVAGFYCVW
HGAEGLRRIARRVCGLAAGLADALRESGVAEEGTVSEEGTFFDTVTFRPLDAGAFDRAAE
AGFDLRRFGDGRLGVTADETTTPEVLAGLLAALGGEAETEPPRTEEPAAIETRRSAVLEH
EVFQNHRTEHAMMRYLHRLAARDYGLCHGMIPLGSCTMKLNAAAEMLPLTWPQFGAVHPH
APASRTAGYRQLFGELERDLAEITGFAAVSLQPNAGSQGEYAGLLAIRGWHRANGDEERD
VCLIPTSAHGTNPASAVIAGMRVVPVRCADNGDIDLDDLTAKCEQHADRLGALMITYPST
HGVFEADIRRCCAVVHEHGGQVYMDGANMNAQVGLTSPGAIGADVCHLNLHKTFCIPHGG
GGPGMGPIGVKLHLRPHLPVSPLRGVSQERVAPPTGGTPVCGSAGLAPAERVPEQEDGGY
SVSAAEFGSPSILTISWMYIRLMGPDGLRAASERAILNANYMAARLRDAYEVLYTGPRGS
VAHEFILDVRPFERSAGVTVDDFAKRLMDHGFHAPTMSWPVAGTLMVEPTESETRAELDR
FCDAMLAIRAEIAKVENGTWPRDDNPLHHAPHTAEAVTDEAWDRPYTRQEAAYPSPAQRE
PGAKFWPSVARIDNPWGDRNLVCSCAPLPPATD
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgccgcgaccgcgacccgccccgcctcctgcgccaccggcttcgccgatcgc
catcacgggcagaggcccgaggacacggcggccatgctcgcggcggtgggggcggagagc
gtggaggcgctgatcgagcggacggtgcccgaggcgatccgggtgcgggaaccgctggac
gtcccggcggcccgctccgaggcggaggcgctcgcggaggtccgcgccatcgccgaccgc
aacgaggtcgtgccgagcctgctcggctgcggctaccacggcacgcacacgcccccggtg
atcctgcgcaacgtgttggagaatccgctgtggtacacgccgtacacgccctatcaggcg
gagatcgcgcagggccggctggagggcctgctcaacttccagacggcgatcagcgacctc
accggcctgccggtcgccggggcgtcgctgctggacgaggccaccgcggcggccgaggcg
atggcgatgtgccacggccaggcgcgggggaagaaggcgaggttcctcgccgacgcgggc
tgccacccgcagacgctcgcggtgctcgagacgcgggcccgcgggctcggcatcgagctg
gtggtgacggacgcggtggcggaggcggcggaggcgctggccgccgaggacgtctcgggc
gtgctggtgcagaacccgacgaccgacggccggctgatccccgccgacacgctggagaag
ctcgccgcccgcacgcacgagcacggggcgctgctggtcgccgcggccgatccgctgtcg
ctgctgctgctgccgggtccggggcagtggggcgcggacgtggcggtgggctcggcccag
cgcttcggggtgccgctgggcttcggcggtccgcacccggcgtacctggcgacgcgggag
caactcgcccgcaagatgcccggccggctgatcggcgtctcccgcgacgcgcgcggccgc
ccggcgctgcggatggcgatccagacccgcgagcagcacatcaagcgcgaccgggcgacc
agcaacatctgcaccgcgcaggcgctgctcgccaacgtggcgggcttctactgcgtgtgg
cacggggcggagggcctgcggcgcatcgcccggcgggtctgcggactggcggccgggctg
gcggacgcgctgcgcgagagcggtgtcgcggaagagggcacggtctccgaggaggggacc
ttcttcgacacggtgacgttccggccgctggacgcgggcgcgttcgatcgtgccgccgag
gccggcttcgacctccgccgcttcggcgacggccggctcggcgtcaccgccgacgagacg
acgacgccggaggtcctcgccggcctgctcgccgccctcggcggtgaagccgagacggag
ccgccgcggaccgaggagcccgccgccatcgagacccgacggtccgcggttctggagcac
gaggtgttccagaaccaccggacagagcacgcgatgatgcggtacctgcaccggctcgcc
gcccgcgactacggcctgtgccacggcatgatcccgctgggctcgtgcacgatgaagctc
aacgccgcggcggagatgctgccgctcacgtggccgcagttcggagcggttcacccgcac
gcccccgcttcgcggaccgccggctaccggcagctgttcggcgagctggagcgcgacctc
gccgagatcaccggcttcgccgccgtctcgctgcagcccaacgccggcagccagggcgag
tacgccggcctgctggcgatccgcggctggcaccgggccaacggcgacgaggagcgcgac
gtctgcctgatcccgacctccgcccacggcaccaaccccgcctccgccgtcatcgccggc
atgcgggtggtgcccgtccggtgcgccgacaacggcgacatcgacctcgacgatctgacg
gccaagtgcgagcagcacgccgacaggctcggcgccctgatgatcacctaccccagcacc
cacggcgtcttcgaggccgacatccgacgctgctgcgcggtcgtccacgagcacggcggg
caggtctacatggacggggcgaacatgaacgcccaggtcggcctcaccagccccggcgcc
atcggtgccgacgtgtgccacctgaacctgcacaagaccttctgcatcccccacggcggc
ggcggcccggggatgggtcccattggcgtgaagcttcacttgcggcctcacctgccggtg
agcccactgcgtggggtgagtcaggaacgcgttgcgcctccgaccgggggaaccccggtc
tgcgggtcggccgggttggctccggcggagcgtgtacccgagcaggaggacgggggctac
agcgtttcggcggcagagttcggctccccgtcgatcctcacgatcagctggatgtacatc
cggctcatgggccccgacggcctgcgggccgccagcgagcgggcgatcctcaacgccaac
tacatggcggcccggctgcgcgacgcttacgaggtcctctacaccggcccccgcggcagc
gtcgcccacgagttcatcctcgacgtgcggcccttcgagcgaagcgccggcgtcaccgtc
gacgacttcgccaagcggctgatggaccacggcttccacgcccccaccatgagctggccc
gtcgccggcacgctgatggtcgagccgaccgagagcgagaccagagccgagctggaccgc
ttctgcgacgcgatgctcgccatccgcgccgagatcgcgaaggtcgagaacggcacctgg
ccccgcgacgacaaccccctccaccacgccccgcacaccgccgaggccgtcaccgacgag
gcctgggaccgcccgtacacccggcaggaggccgcgtacccgtcgcccgcacagcgcgaa
cccggcgccaagttctggccgagcgtcgcccgcatcgacaacccctggggtgaccggaac
ctggtctgctcctgcgcgccgcttccgcctgcgacggactga
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