Phycisphaera mikurensis: PSMK_24200
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Entry
PSMK_24200 CDS
T01800
Name
(GenBank) putative DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
phm
Phycisphaera mikurensis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phm03032
]
PSMK_24200
03036 Chromosome and associated proteins [BR:
phm03036
]
PSMK_24200
03400 DNA repair and recombination proteins [BR:
phm03400
]
PSMK_24200
DNA replication proteins [BR:
phm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSMK_24200
Chromosome and associated proteins [BR:
phm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PSMK_24200
DNA repair and recombination proteins [BR:
phm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PSMK_24200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF4777
Motif
Other DBs
NCBI-ProteinID:
BAM04579
UniProt:
I0IH41
LinkDB
All DBs
Position
2868721..2869101
Genome browser
AA seq
126 aa
AA seq
DB search
MSTVTKKELIEHIAQATNHKRVIVKQVVQEFLDQVIVELGQDNRLEFRDFGVFEVKLRQP
RMAQNPKTLEPVWVPAKRSVRFKTGRQMRHVLAERDAADAPPGGGADHDGAGVGGDRSGG
GSASTA
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtaacgaagaaggagttgatcgaacacattgcgcaagccaccaaccacaag
cgggtgatcgtcaagcaggtggtgcaggagttcctcgaccaggtgatcgtggagctcggg
caggacaaccgcctcgagttccgggacttcggcgtcttcgaggtgaagctgcgacagccg
cggatggcgcagaaccccaagacgctcgagccggtttgggtgcccgccaagcggagcgtc
cgcttcaagaccgggcgccagatgcggcacgtgctcgcggagcgggacgccgccgacgcg
cccccgggcggcggtgccgaccacgacggagccggcgtcgggggggaccgatccggtggc
gggtcggcctcgaccgcttga
DBGET
integrated database retrieval system
