Phycisphaera mikurensis: PSMK_30790
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Entry
PSMK_30790 CDS
T01800
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00300
Lysine biosynthesis
phm00470
D-Amino acid metabolism
phm01100
Metabolic pathways
phm01110
Biosynthesis of secondary metabolites
phm01120
Microbial metabolism in diverse environments
phm01230
Biosynthesis of amino acids
Module
phm_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSMK_30790 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSMK_30790 (dapF)
Enzymes [BR:
phm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSMK_30790 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BAM05238
UniProt:
I0IJ00
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All DBs
Position
3654909..3655805
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AA seq
298 aa
AA seq
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MLPFVKYHGLGNDYVYVDGFTHDVPDPAGLARAVSPRNFAIGADGLILVLPATPGGGAAG
AHCRMRMFNADGSEGQMCGNGLRCVVKFAHDHALFAGSNAARPMRVETGAGVLAVGYDLD
AAGRVATVTVDMGRPILAPERVPVDVSELEPGAGEHAWRIPATDTTPPQEAVLVSMGNPH
AVLFRDDPLDAAEERRIGAALEHHRAFPERMNLHAVHVRGGGEVDVVHWERGSGPTLACG
TGAAAVCVAGVLTGRTPHRITTHLPGGPLVLDWAETTGRVAMTGPAVEAFTGVWRGPL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctccccttcgtcaagtaccacggcctgggcaacgactacgtgtacgtggacggtttc
acgcacgacgtgcccgatccggcggggctggcgcgggcggtgtcgccgcggaacttcgcg
atcggggccgacgggctgatcctcgtgctgccggcgacgcccgggggcggcgcggccggt
gcccactgccggatgcggatgttcaacgccgacggcagcgaggggcagatgtgcgggaac
ggcctccgctgcgtcgtgaagttcgctcacgaccacgcgctcttcgccgggtccaacgcg
gcgcggccgatgcgggtggagaccggcgcgggcgtgctggcggtcggctacgacctcgac
gcggccggccgggtggcgaccgtgaccgtcgacatgggccggccgatcctcgcgcccgag
cgtgtgcccgtggacgtgtcggagctggagcccggcgcgggcgagcacgcctggaggatc
ccggcgacggacacgacgccgccgcaggaggccgtcctcgtctcgatgggcaacccgcac
gcggtgctgttccgcgacgacccgctggacgcggccgaggagcggcggatcggggcggcg
ctggagcatcaccgcgccttccccgaacggatgaacctgcacgccgtccacgtccgcggc
ggcggcgaggtggacgtggtgcactgggaacgcggcagcgggccgacgctggcctgcggc
accggggccgcggcggtgtgcgtcgcgggcgtgctcaccggccgcacgccgcaccggatc
acgacgcacctgcccggcggaccgctcgtgctcgattgggccgagaccaccggccgcgtc
gcgatgaccggccccgccgtcgaagccttcaccggtgtctggcgcgggcccctctga
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