Phycisphaera mikurensis: PSMK_31520
Help
Entry
PSMK_31520 CDS
T01800
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00020
Citrate cycle (TCA cycle)
phm00480
Glutathione metabolism
phm00720
Other carbon fixation pathways
phm01100
Metabolic pathways
phm01110
Biosynthesis of secondary metabolites
phm01120
Microbial metabolism in diverse environments
phm01200
Carbon metabolism
phm01210
2-Oxocarboxylic acid metabolism
phm01230
Biosynthesis of amino acids
phm04146
Peroxisome
Module
phm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phm_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSMK_31520 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
PSMK_31520 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PSMK_31520 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSMK_31520 (icd)
Enzymes [BR:
phm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PSMK_31520 (icd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Isocitrate_DH_C_bact
Motif
Other DBs
NCBI-ProteinID:
BAM05311
UniProt:
I0IJ73
LinkDB
All DBs
Position
complement(3742480..3743919)
Genome browser
AA seq
479 aa
AA seq
DB search
MAVAHGDGIGPEIMDATLRVLDAAGAGLVYDTIEIGKKVYERGVSAGIEASSWDTLRKHR
VFLKAPITTPQGGGYKSLNVTTRKTLGLYANVRPCVAYAPFVGSRHPGMDVVIVRENEED
TYGGIEHRQTAEVTQCLKLISRPGCEKIVRHAFEYARAAGRKRVSCFTKDNIMKATDGLF
HRVFDEIRGEYPEIESDHWIIDIGAAMLADRPERFDVILTLNLYGDVLSDIAAQIAGSVG
LCGTSNIGDTCSMFEAIHGSAPDIAGRDVANPTGLLLAAVQMLVHLNKPGAAEKIHNAVL
RTIEDGVHTADLHDGRGHDPVGTRAFADAVIQRLGQRPEHLPAAVYAGVADRAAPGVGPA
TREKPVKALVGVDVFLDWDPAERDPDALAAELHAAADGQPLQLQMITNRGVKVWPEGFPE
TFCTDHWRCRFVPRGGGEASHRQVLGLLTRLADAGLDFIKTEHLCTFDGEAGFSLGQGQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtcgcgcacggcgacggcatcggccccgagatcatggacgcgacgctccgcgtg
ctcgacgcggccggtgccggcttggtctacgacaccatcgagatcggcaagaaggtctac
gagcgcggcgtctccgcgggcatcgaggcctcttcgtgggacacgctccggaagcaccgg
gtgttcctgaaggccccgatcaccacgccccagggcggcggctacaagtcgctgaacgtg
acgacccgcaagacgctggggctttacgcgaacgtacgcccgtgcgtcgcctacgcgccc
ttcgtcgggagccggcacccgggcatggacgtcgtgatcgtccgcgagaacgaggaggac
acctacggcggcatcgagcaccgccagacggccgaggtgacgcagtgcctcaagctcatc
tcgcggcccggctgcgagaagatcgtccgccacgccttcgagtacgcccgcgccgccggc
cgcaagcgggtcagctgcttcacgaaggacaacatcatgaaggcgaccgacggcctcttc
caccgggtcttcgacgagatccgcggcgagtaccccgagatcgagtcggaccactggatc
atcgacatcggcgccgcgatgctcgccgaccggcccgagcgcttcgacgtgatcctcacg
ctgaacctctacggcgacgtgctctcggacatcgccgcccagatcgccggcagcgtcggc
ctgtgcggcacctcgaacatcggcgacacctgctcgatgttcgaggcgatccacggcagc
gcccccgacatcgccgggcgcgacgtcgccaaccccacgggcctgctgctcgcggccgtg
cagatgctcgtgcacctcaacaagcccggggccgccgagaagatccacaacgcggtgctc
cgcacgatcgaggacggcgtgcacaccgccgacctgcacgacggccggggccacgacccg
gtcggcacccgcgccttcgccgacgcggtgatccagcggctcggccagcggcccgagcac
ctgccggccgcggtctatgccggggtcgcggatcgcgcggccccgggcgtcgggccggcg
acgcgggagaagccggtgaaggcgctcgtcggggtggacgtcttcctggactgggacccg
gcggagcgggaccccgacgcgctcgccgcggagctccacgcggcggccgatggccagccg
ctccagctgcagatgatcaccaaccggggcgtgaaggtgtggccggagggcttccccgaa
accttctgcaccgaccactggcgctgccgcttcgtgccccggggcgggggcgaggcctcg
caccggcaggtcctcggcctgctgacccggctcgccgacgccgggctggacttcatcaag
accgagcacctgtgcaccttcgacggcgaggcgggcttctcgctcggccaggggcagtag
DBGET
integrated database retrieval system