Paenalcaligenes hominis: PAEH1_03050
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Entry
PAEH1_03050 CDS
T04704
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phn
Paenalcaligenes hominis
Pathway
phn03410
Base excision repair
phn03430
Mismatch repair
phn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAEH1_03050
03430 Mismatch repair
PAEH1_03050
03440 Homologous recombination
PAEH1_03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phn03400
]
PAEH1_03050
DNA repair and recombination proteins [BR:
phn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PAEH1_03050
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PAEH1_03050
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PAEH1_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
bMG1
DUF919
Motif
Other DBs
NCBI-ProteinID:
AQS50798
UniProt:
A0A1U9JYF0
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All DBs
Position
561689..563404
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AA seq
571 aa
AA seq
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MEITLARPVLSPRPSQPDIADQLTHAGLHPLLAQLFAARHVTDVQQTSSRWNALLAPHSL
HDINKGTQLLADAIEEQLRIVIVADYDCDGATACAIGMRALSEMGADVDFFVPNRFETGY
GLSPEVVELLLHHPNGKPDLIVTVDNGIASVEGVALANQLGMQVLITDHHLPGDTLPAAA
AIINPSHPQCAFPSKNLAGVGVIFYLMLALRAELRERGAFDLEDQPRLDQLADILALGTV
ADVVKLDANNRLLVAQGLKQIRQGNAHAGIQALFTVAGRQPQLANAFDLGFAVGPRINAA
GRLEDMSIGIRCLCTDDPLEAMELAQELDRINQARRQIETQMHQSALRSVEQMMQMEPRA
SVCVHQADWHQGVVGLVASRLKERYWRPTIAFAPGDNGELKGSGRSIPDVHLRDVLDLVS
KKHPGLILKFGGHSMAAGLSIHQNSLSLFEQAFDQAVVEFTGKTQFDPVIEHDGSLAVEF
MDIPTADLLSQQVWGAGFPAPTFVDSFRVVHQRVLKEKHLKLRVERDGLIFDAIWFNQNQ
PVHDHIEMAYRLDVNHWNGQSRLQLMVEFAH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
ttggagatcacattggctcgtccagtcttaagtcctcgtccctcacagcccgatatagca
gatcaactgactcatgctggattacatccattattagcgcaactgtttgccgcccgtcac
gtcaccgatgtgcagcaaacgagctcccgttggaatgccttactagccccgcatagcttg
catgatattaataaagggacacagctattagcggatgccatagaggaacagctacgcatc
gttattgtggctgactacgactgtgatggggcaactgcgtgtgccattgggatgcgcgca
ttaagtgaaatgggagccgatgtggatttcttcgtccccaatcgatttgaaacagggtac
ggcttgtcgcctgaggtcgttgagctgctattgcaccatccaaacggtaaacccgatttg
atcgtcaccgtagacaacggtattgcaagtgtagaaggcgttgcattagcaaatcaactg
ggcatgcaagtcctcattactgatcaccacttgcctggtgacacccttcctgctgcggca
gctattattaaccctagccatccccagtgtgcatttccttctaaaaatcttgctggcgtc
ggcgttattttttatcttatgttggctttacgcgctgaactgcgggaacgcggcgcattt
gatcttgaggaccagccccgccttgatcaactcgcagacattctggctttaggcaccgta
gccgatgtggttaaactggacgccaataatcgcttactggtggctcaaggtctaaagcaa
attcgtcaaggcaacgcccatgcaggtattcaagccttatttactgtcgcagggcgacag
ccccagctcgccaatgcgtttgatttaggctttgcggtaggccctcgcattaatgcagct
ggacggctcgaggacatgagtatcgggattcgctgcttatgcactgacgacccgcttgag
gcaatggaactagctcaagagttagaccgtattaatcaagcgcgccgtcaaattgaaacc
caaatgcaccaaagtgcactgcgctctgtagagcaaatgatgcaaatggagccacgcgct
agtgtgtgcgtccatcaagctgactggcatcaaggggtagtaggactggtggcttcccga
ttgaaagaacgctactggcgccctactattgcctttgctcctggcgataacggggaactt
aaaggctcaggccgttctattcctgatgtgcatttacgcgacgtattggatttagtatcg
aaaaaacaccccggattaattttgaagtttgggggacactcgatggcagcaggcttgagt
atccaccaaaacagcctaagtctatttgagcaagcttttgatcaagcagtagtggaattc
actggcaaaacccagtttgatcctgtcattgagcatgacgggtctttggccgttgagttt
atggatattcctactgccgatttgctgagccaacaagtctggggggccggtttccctgcc
cctacctttgtagacagttttcgtgttgtgcatcaacgcgtgcttaaggaaaaacatttg
aaactgcgcgtagagcgcgacggtttgatctttgatgccatttggtttaatcaaaaccaa
cccgttcacgaccacattgaaatggcttaccgcctggatgtgaatcactggaatggccaa
agtcgactgcagcttatggttgagtttgcccattaa
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