Paenalcaligenes hominis: PAEH1_04545
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Entry
PAEH1_04545 CDS
T04704
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
phn
Paenalcaligenes hominis
Brite
KEGG Orthology (KO) [BR:
phn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phn03032
]
PAEH1_04545
03036 Chromosome and associated proteins [BR:
phn03036
]
PAEH1_04545
03400 DNA repair and recombination proteins [BR:
phn03400
]
PAEH1_04545
DNA replication proteins [BR:
phn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PAEH1_04545
Chromosome and associated proteins [BR:
phn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PAEH1_04545
DNA repair and recombination proteins [BR:
phn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PAEH1_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AQS51024
UniProt:
A0A1U9JZ53
LinkDB
All DBs
Position
complement(892174..892479)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIALLASRNTQLAPKDTELTVKTILDAMTTALENGHRIEIRGFGSFSLSTRASRI
GRNPRSGEKVHVPAKQVPHFKAGKELRERVDNAFLAQQPNS
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaagtctgagcttattgcactgttggccagccgcaatacgcagctggccccaaag
gacacagagctgacggtaaagactattcttgatgccatgaccacagcattagaaaacggt
catcgtatagaaatcagggggtttggtagtttttccctgtctacacgggcatcacgtata
gggcgcaaccctcgctctggcgaaaaagtccatgtgcccgcaaaacaagtaccacacttt
aaggcaggtaaagagctccgcgaacgggttgataatgcttttttagcacaacagcctaac
tcgtag
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