Paenalcaligenes hominis: PAEH1_06655
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Entry
PAEH1_06655 CDS
T04704
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
phn
Paenalcaligenes hominis
Brite
KEGG Orthology (KO) [BR:
phn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phn03016
]
PAEH1_06655
Enzymes [BR:
phn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PAEH1_06655
Transfer RNA biogenesis [BR:
phn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PAEH1_06655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
UPF0158
Motif
Other DBs
NCBI-ProteinID:
AQS51315
UniProt:
A0A1U9JZV3
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All DBs
Position
1322830..1324746
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AA seq
638 aa
AA seq
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MYVLFEDSGKFKAEKIFSDADTTMQVESATGKRSKIRKNNVFFEFAQPEPAALLEQAEQL
AADLDIQFLWECAPQDEFNAVDFAEDYFGHPPSAVEKTALILALHGAPAYFHRRGKGLYR
SAPPEILEAALAAIEKKREQAAQQEQWTAAMIAGELPAPIAAAANSLLSSPDKNSLEWKA
FDAAVKELNCSPEQLLLDLNAWSSPLALHRHRFFSQHFPRGTDFPDIELGTEWGTDLPVA
AVTAYSIDDAGTTEIDDALSIQALAPHQWRVGVHIATPGLAVQRDNELDAIARKRLSTLY
TPGQKVPMLPEAVIRAFSLDEGIERPALSLYVDVDLQSQTITHTRTVLERICVKENLRQH
QLDPFVTVEALNDPSIALPYGDWLRPLWQVSQFLGQQREQVRGKPENNNRVEFLFELAGA
PDDPDSIVSLIPRVRNAPVGLITAEMMILANNIWGGLLAQHDVPGIYRSQQNMRTRMSTH
ALPHDSIGVPQYAWSTSPLRRYVDLVNQWQILAAAEHGVSARLVAPFKPKESDLYSIISA
FEAQYSTWNDFQNQIERYWVLRWLQQQGITQMPVTLIKEDLVRFDLAPFVMRLPGIGEFE
RGQKLIIDLLSFNELELTIEARLRDVVTPNEEATSPSV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcctttttgaagacagcggtaaatttaaagctgaaaaaatattttctgatgca
gacaccaccatgcaggttgaatccgcaacaggaaaacgcagcaaaattcgtaaaaacaac
gtgtttttcgaattcgcgcaaccagagccggctgctttgttagagcaagccgaacagctc
gctgccgacctggatattcagttcttatgggaatgtgcccctcaggacgagttcaacgcg
gtggattttgctgaggattactttggacatccacctagcgcagtagaaaaaacggccttg
attctagcgttacacggggcgcctgcttactttcaccgtcgaggtaaagggctgtatcgt
agcgccccacctgaaatcctcgaggcggccttagcggcgatagaaaaaaagcgcgaacaa
gccgcacagcaagaacaatggaccgcggccatgatagcgggcgagctaccagccccgatt
gccgcggcagctaatagcttattaagcagtccggataaaaacagcctcgaatggaaagcc
tttgacgccgctgtgaaagagcttaactgcagccctgaacagctattattggatcttaac
gcatggtccagccccttggctttacaccgccatcgttttttctcgcagcatttcccccgc
ggtacggactttccagacattgagttgggcactgagtggggtactgatttaccagttgct
gccgtcacggcctactccattgatgatgcaggcactacagaaatcgatgatgccttatcc
atccaagcgcttgctccgcatcagtggcgggtaggtgtgcatattgccacgccgggttta
gccgtacagcgtgacaatgaactcgacgcgattgcacgtaaacgcttatccaccttatac
acccctgggcagaaagttcccatgttgcccgaagccgtcatccgtgctttttccttagac
gagggcatcgagcgtcctgccttatccctctatgttgatgtcgatctgcaatcccaaacc
attacgcacacgcgtaccgtcctagagcgtatttgtgtcaaagaaaatctacgtcaacat
cagcttgatccattcgtcacagtagaagcgctcaatgacccaagcatcgcattaccctat
ggggattggctacggcctttgtggcaggtcagccaatttttaggccaacaacgtgaacag
gtgcgcggcaagccagaaaacaataatcgtgttgagtttttgttcgagctcgccggagcg
cctgatgacccggatagcatcgtgagcttaattccacgcgtacgcaatgcccctgtgggc
ctgatcacagcagaaatgatgatcttggccaataacatctggggcgggctattagctcaa
cacgatgtgccgggcatttatcgctcccaacaaaatatgcgtacccgcatgtcgacccat
gccttgccccacgacagcattggggtgcctcagtacgcttggtctacctctcctttgcgc
cgctatgtggacttagtgaatcaatggcaaatccttgctgctgccgaacatggggtgtct
gcgcggctggtcgcccccttcaagcctaaagagtccgatctgtacagtattattagtgct
tttgaagctcaatacagcacatggaatgatttccaaaatcaaattgagcgctattgggta
ctacgttggttgcaacaacaaggcattactcaaatgccagtaacgcttatcaaagaggat
ctggtccgttttgaccttgctccttttgtgatgcgcctacccggcatcggcgaatttgag
cgcggccaaaaacttattattgacctcttaagctttaatgaactagagctaaccatagag
gctcgcctccgagacgttgtgacccctaacgaggaagccaccagcccaagcgtttaa
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