Pyrococcus horikoshii: PH0044
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Entry
PH0044 CDS
T00014
Symbol
PH0044
Name
(GenBank) 855aa long hypothetical protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
pho
Pyrococcus horikoshii
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pho03019
]
PH0044 (PH0044)
Messenger RNA biogenesis [BR:
pho03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
PH0044 (PH0044)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
HemN_C
DEXQc_Suv3
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAA29112
UniProt:
O57819
LinkDB
All DBs
Position
complement(38909..41476)
Genome browser
AA seq
855 aa
AA seq
DB search
MLFVIREGRKKGELEAFLIENPPEKLSQIRNVKADRIFRLIMRDGRLFKVLEGSQYRNPK
EIEKLLRSSRIILADADEWEDYFRKKLMNKNVEKASLCRLCLLEGRITVLTEGNRIKYRN
EYICERCAEEELKNELRVRFNSLGMLEQAKRLLAKFRDLDKVLYAFDPRFDPTEHPEVTK
WDELKAKHVRVERMKVDEVDIPESFKNVLKLEGITELLPVQVLAIKNGLLKGENLLVVSA
TASGKTLIGELAGIPKALEGKKMLFLVPLVALANQKYEDFKRRYSKLGLKVAIRVGMSRI
KTREEPVVVDTGIDADIIVGTYEGVDYLLRSGKKIGNVGTVVIDEIHMIDDEERGPRLDG
LIARLRKLYPKAQFIGLSATVGNPQELARSLGMKLVLYDERPVDLERHLIIARNESEKWR
IIAKLCKAEVMRKSSKGFKGQTIVFTYSRKRCHELASFLTGKGLKAKPYHSGLPYKQRKI
TEMEFQAQMIDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGKVYLIVEPGKKYSAQMDETEDEVALKLLTSPIEPVIVEWSDEIEEDNVLAHACVFNR
LSVIEEVNSLTLGANRSAKKVLEKLEELGMVSIRGDIVRVTPYGRAVSMSFLLPSEGEFI
RENLESMDPLGMAIHLLPFENAYLPGFLQREIESAVRGRISSNIFSSSFASVLEELDKII
PEISPNAADRLFLIYQDFFNCLEQDCTEFAMEMLSRKIAELRRDGYEPSKISEYFRKVYG
LILYPGDVFTWLDGLIRKLEAIQRIAGVFKKKEVENEALLVKKELEEGRRFKVRGKDKLK
GGEERWKKIARERRL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgctattcgtaataagggaagggaggaaaaagggagagcttgaagcatttttaatcgaa
aatcctcccgagaagctctcacaaattaggaatgttaaagccgataggatctttagatta
ataatgagggatggaaggttatttaaagttctggaggggagtcaatataggaatcctaaa
gaaattgagaagctcttaaggagctcaaggataattttggccgacgctgatgagtgggaa
gactacttcaggaaaaagctaatgaataagaacgttgagaaggcatccctctgtaggctc
tgtctccttgaggggagaataactgttctaactgagggaaataggataaagtacaggaac
gagtacatatgcgagaggtgtgctgaagaagaactaaaaaacgaacttagggtaaggttt
aactctctgggaatgctggagcaagcaaaaagacttttagctaagtttagagatcttgac
aaggttctctatgcattcgatccaaggttcgatccaactgagcatcctgaggttacaaag
tgggatgagctcaaggccaagcacgttagagttgagaggatgaaggttgatgaagtggat
atccctgagagcttcaaaaatgtcctaaagttggaagggattactgagttactcccagtt
caggttttagctataaagaatggccttttaaagggggaaaatcttttggtggtctcagca
accgcgagcggtaagaccctcataggggagcttgccggaattccaaaggccttagaaggg
aagaaaatgctgttccttgttcctctggtggccctggccaatcaaaagtatgaagacttt
aaaaggaggtattcgaagcttggcctcaaggttgcaataagggttggtatgagtaggata
aaaacaagggaggaacctgtagtagttgataccgggatagatgccgacataatagtggga
acgtacgagggggtagactacctactgaggtctggaaagaaaataggaaacgtgggaacg
gtggttatagatgagattcacatgatagatgacgaggagagggggccaaggttagatggt
ttaatcgcaaggctaagaaagctctatcctaaagcccaatttattgggctctccgcaacc
gttggtaatcctcaagagttagctagatccctgggaatgaagcttgtcctttatgatgag
agacccgtggatttggagaggcaccttataatagcgaggaacgagagcgagaagtggagg
ataatagctaagctttgcaaagctgaagttatgaggaaaagctcaaaggggtttaagggt
cagacgatagtctttacgtactcaaggaagaggtgccatgaattggcctccttcctaact
ggaaagggattaaaggccaagccctaccactcgggtttaccctataagcagagaaagata
actgagatggagtttcaagctcaaatgatagatgtcgtcgtaaccacagcagcccttgga
gctggtgtagacttcccggcgagccaagtgatattcgaaagcctagccatggggaataag
tggcttagcgttagggaattccatcaaatgcttgggagggccgggagaccgctttatcac
gaaaaggggaaggtctatttaatagttgagcctggaaaaaagtattcggctcagatggat
gaaactgaggatgaagttgccctaaagctacttacatctcctatagagcccgtaatcgtt
gaatggagcgatgaaatagaggaagataatgtgctcgcccatgcatgcgtgtttaacagg
cttagcgttatagaggaggttaactctctaaccctcggcgctaacaggagtgctaaaaaa
gtcctagagaagcttgaagagcttggaatggtaagcatcaggggagacatcgtcagggta
accccttacggaagggccgttagcatgagctttttgctcccaagcgagggcgagttcata
agggagaaccttgaaagcatggatccccttggaatggctattcacttgctcccctttgag
aacgcttaccttcctgggttccttcagagggagatagaatctgccgtgaggggaaggata
agctccaacatattttcgagttccttcgcttcagtgcttgaggagttagataagataata
cctgagataagtcccaacgccgctgatagactattcctaatctaccaggacttctttaac
tgcctcgagcaggattgtactgaatttgcgatggaaatgttgagtaggaagatagctgag
ttgagaagggatgggtatgagccctcaaagatctcagagtactttagaaaggtttatggt
ttaatactttatcctggggatgtattcacatggctcgatggacttataaggaagcttgag
gctattcaaaggatagctggagtgttcaaaaagaaagaggtcgaaaatgaagctcttctc
gttaagaaggaattagaagaggggagaagatttaaagtacggggtaaagataaacttaag
ggaggggaggaaaggtggaagaaaatagcgagagaaagaagactataa
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