Pyrococcus horikoshii: PH0295
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Entry
PH0295 CDS
T00014
Symbol
PH0295
Name
(GenBank) 170aa long hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pho
Pyrococcus horikoshii
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pho03016
]
PH0295 (PH0295)
Enzymes [BR:
pho01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PH0295 (PH0295)
Transfer RNA biogenesis [BR:
pho03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PH0295 (PH0295)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
DUF2160
Motif
Other DBs
NCBI-ProteinID:
BAA29367
UniProt:
O58033
LinkDB
All DBs
Position
complement(261557..262069)
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AA seq
170 aa
AA seq
DB search
MKKPIEFYLSGDRVYSTREKAINQLYNNRGYGELKGDKLFLSLIEAAYLTEKGWIKVVDK
DKELKFDDLMKLGKSRDEDFDIKYIVYKDLRDRGYIVKSALKFGSHYRVYRKDAEHSDWL
IWVLRENQRLSPNDITARARVAHGVRKNMVLAIVDEDGDVVYYKVEWIKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcctatagagttttatttaagtggggacagagtttacagcacaagggagaag
gccataaatcagctatacaacaatagggggtatggagagcttaagggagataaactgttc
ttatctttaattgaagcggcatatctaacagaaaaaggttggataaaagttgttgataag
gacaaagagcttaaatttgacgacctaatgaagttgggtaagagcagggatgaagatttt
gacataaaatacatcgtttacaaggatctcagggataggggatatatagttaaatcggcc
ctaaagttcggttctcactacagggtttacaggaaggatgcggagcattctgactggctt
atctgggttctaagggaaaatcaaagactctcacctaatgacatcacggcaagagcaagg
gtagcccatggcgttaggaagaacatggtgctggcaatagttgatgaagacggtgatgtt
gtttactataaggttgagtggatcaagttctaa
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