Pyrococcus horikoshii: PH0619
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Entry
PH0619 CDS
T00014
Symbol
PH0619
Name
(GenBank) 197aa long hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pho
Pyrococcus horikoshii
Pathway
pho03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PH0619 (PH0619)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pho03021
]
PH0619 (PH0619)
Transcription machinery [BR:
pho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
PH0619 (PH0619)
Prokaryotic type
Archaeal type
TFE
PH0619 (PH0619)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7342
HTH_24
Rad50_zn_hook
Sigma70_r3
HTH_5
TrmB
HTH_20
HTH_DeoR
HTH_9
HTH_AsnC-type
HTH_Crp_2
POLR3C_WHD
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BAA29708
UniProt:
O58353
LinkDB
All DBs
Position
complement(554623..555216)
Genome browser
AA seq
197 aa
AA seq
DB search
MGGEQRMSKRNKELLEIGRDIGGDEAVEIIKALEKKGEATDEELAEITGIRVNTVRKILY
ALYDAKLADFRRVKDDETGWYYYYWHIETKRLPEIIRARKMQELEKLKKMLQEETSEVYY
HCGNPDHPKLTFDEAFEYGFVCPICGEILHQYDNSAVIEELKKRIEELEIELGLRAPPKK
EKKGKKSKKRSKKSKKK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtggggggagaacagagaatgtcaaaaagaaacaaggaattgcttgagatcggcagggac
attgggggagatgaggctgtcgagataattaaagccttagaaaaaaagggcgaggccaca
gacgaagaattagcggagattacagggataagagttaacacagttaggaaaatattatat
gctctatatgatgcaaagctagccgactttagaagggtaaaagatgatgaaacagggtgg
tattactactattggcacatagaaacaaaaagattaccagagataataagagctagaaaa
atgcaggagcttgaaaagctgaaaaagatgcttcaggaagagacgagtgaagtatattat
cactgtggcaatccggatcatccgaagttaacatttgatgaagcctttgaatacggattc
gtatgcccaatatgtggggagatcttacaccagtatgacaactcagctgtcattgaggag
ttaaagaaaaggatcgaggagttagagattgaactcggactaagagctccacctaaaaag
gagaagaaaggaaagaaaagcaagaaaagatccaaaaaaagcaagaaaaagtga
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