Pyrococcus horikoshii: PH0622
Help
Entry
PH0622 CDS
T00014
Symbol
PH0622
Name
(GenBank) 686aa long hypothetical DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pho
Pyrococcus horikoshii
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pho03032
]
PH0622 (PH0622)
03400 DNA repair and recombination proteins [BR:
pho03400
]
PH0622 (PH0622)
Enzymes [BR:
pho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PH0622 (PH0622)
DNA replication proteins [BR:
pho03032
]
Prokaryotic type
DNA Topoisomerases
PH0622 (PH0622)
DNA repair and recombination proteins [BR:
pho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PH0622 (PH0622)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
SHLD1_C
Motif
Other DBs
NCBI-ProteinID:
BAA29711
UniProt:
O58356
LinkDB
All DBs
Position
557792..559852
Genome browser
AA seq
686 aa
AA seq
DB search
MILIIAEKPNVARKIAGALSERRPIKKSLFGVPYYEIFREGKKLIVASAVGHLYGLAPKR
DVFGYPIFDIEWVPVYIAEKGKEYAREYIKALSVLAKRVREFIVACDYDTEGEVIGYTAL
KYACGVDPRVAKRMKFSALTKRDLLNAWRNLEPTINFGMANAGIARHILDWYWGVNLSRA
LTHAIKKASGKWVVLSTGRVQGPTLKFLVEREREIQSFVPRPYWVIKLIFEKNGQKFTAN
YEKDKIWEEEEGKRIVLEVKKSIPRVSNVEIKRQKRTPPHPFDLGTLQREAYSAFGFSPK
KTLDIAQSLYEKGFSSYPRTESQKLPRNINFRMIIQNLAKMPQYRPYAHILLGLPELKPV
EGKKEDPAHPAIYPTGEIPRPGDLTKDEEKLYDMIVRRFLAVFMEPAIRESVKVTIRAGP
HKFFLSGGRTVKKGWLSVYGKYVKFEEVTLPEFFIGERIKVIQVKREKKKTKPPARYSPA
AVIKKMEDLGLGTKATRAQILETLYQRGYIEGKKSIKVTPLGMKVIETLEKYVPEIISVE
LTREFEKKMELIMEGRLTKEEVIEEAKERLTKILEEFKKRELEIGIELAKIVVGEDEVKP
LVVGKCPKCGGDLIVKYNKKTGKRFVGCSNWPKCDVTYPILQRGEIIPTNKTCCNGAPVV
IIREEDGREFEICLDINCKDWKAKSH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatcttaataatagcggaaaaaccaaatgttgcaaggaagatagctggggcactttca
gagaggaggccaataaagaagtctctcttcggcgttccctactatgaaattttcagggag
gggaaaaagctaatagtagcttccgcagttggtcacctctatggtttagcccccaagcgg
gatgtatttggttatccaatattcgacattgagtgggttccagtttacatagccgaaaag
ggtaaggagtacgcaagggagtatattaaagccctctcggttcttgctaagagggtgaga
gagttcatagttgcatgtgactacgatactgagggagaagttataggttacacggccctg
aaatacgcttgtggcgttgatcctagggttgctaagaggatgaagttttcagcattgacc
aagagagatctattgaatgcttggcgaaatctcgagccaacgataaactttgggatggca
aatgctggaatcgcgagacatatcctagactggtactggggggtgaacctctcaagggcc
ttaacgcatgctataaagaaggcttcgggtaagtgggtggtgctaagcaccggtagggtt
caggggccaactctaaagttcctagttgaaagggaaagagaaatacagagttttgttcca
aggccttactgggttatcaaactgatatttgagaaaaacggtcaaaaatttactgccaac
tatgaaaaagacaagatatgggaagaggaagagggaaagagaatagttttagaggttaaa
aagagcatcccaagagtttctaatgtagagataaaaagacagaagagaactccccctcat
ccctttgatctcggtacacttcaaagagaagcctactcagcttttggctttagccctaag
aaaactcttgacatagctcagagcctatatgaaaaaggattctcgagctatccgagaacc
gaaagccagaagttacccaggaacatcaactttaggatgataattcaaaatcttgcaaag
atgcctcagtataggccttatgctcatatcctactgggattaccagaacttaaaccagtt
gaggggaaaaaggaagatcccgctcatcccgctatttatccaacgggagaaattcctagg
ccgggggatctaacgaaagatgaagaaaaattatatgatatgatagtcagaaggttccta
gctgtatttatggaaccagcgattagggaaagtgtaaaggttaccataagggccggcccc
cataaatttttcttgtcgggtgggagaacggttaaaaaaggttggctaagtgtctatggg
aaatatgtgaaattcgaggaagttacgctccctgaattctttattggtgagaggataaag
gtaattcaagttaaaagagaaaagaagaaaactaaacctcctgccaggtattctcccgct
gccgtgataaagaagatggaagatcttggccttgggactaaagctaccagagctcaaatc
cttgaaaccctttatcagaggggttacattgaaggtaagaagagcattaaagttacacct
ctcgggatgaaagttatagaaacgttggagaagtacgttcccgagatcataagtgttgaa
ttaactagggaattcgagaagaagatggagttgataatggaagggaggctcactaaggag
gaggtaatagaggaagccaaagagaggcttaccaagatcctggaggagtttaaaaagaga
gaactggagataggtatagaactcgctaaaatcgtcgttggtgaggatgaagttaagccc
cttgtagttggtaagtgtccaaagtgtggcggggatttaatagttaagtacaacaagaag
acaggaaagaggttcgttggatgctcaaattggccgaagtgcgatgtaacttatccgatc
cttcagaggggagaaataatacctaccaataagacgtgctgtaatggtgctccggtagtt
ataatcagggaagaggatgggagagaattcgaaatatgcctcgacattaactgcaaggac
tggaaagctaaatctcattaa
DBGET
integrated database retrieval system
