Pyrococcus horikoshii: PH1538
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Entry
PH1538 CDS
T00014
Symbol
PH1538
Name
(GenBank) 409aa long hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pho
Pyrococcus horikoshii
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pho03016
]
PH1538 (PH1538)
Enzymes [BR:
pho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PH1538 (PH1538)
Transfer RNA biogenesis [BR:
pho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PH1538 (PH1538)
Prokaryotic type
PH1538 (PH1538)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SPATA1_C
Motif
Other DBs
NCBI-ProteinID:
BAA30648
UniProt:
O59207
LinkDB
All DBs
Position
complement(1367672..1368901)
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AA seq
409 aa
AA seq
DB search
MLEDPLRNLRYLTSSPGIGGKIKVYPEDFIVKEVIPKSIFRGGRCRIYLLKKKNWETMAA
IKEIAKRIGIHYSEIGFAGTKDRHAVTYQYISICREVDLENVAIKDVTLRFVGYGRPLKL
GLLLGNFFKIRVRDTTPELLPNILKEAKEKGGFPNYFGIQRFGEKRSVNHIVGKLLLLGK
YEEAAEVFLGYPGNGMEGDEARKKFLETKNVDLALEEFPKFLRYERAMLYKYRETGSWKR
SFLALPRPILRIFIHAFQSYLFNLYISRRIEEGFPLNEALPGDIVVQVKKGIPLRDRTYR
VTESNLDFVNEKIMQGEAMVSGPIFGYSYRRSHGIPGRLEDEILEEAGVSLENFKRLPKP
MREPGGRRELLIKPRGFRYKTEGRDVLFKFFLPKGVYATSVLREIIKPT
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgctagaggatcctttaaggaaccttcggtatttaacatcatctcctgggataggtggg
aaaataaaagtgtatcctgaagattttatcgtaaaggaggtaattccaaagtcaatcttt
aggggaggaaggtgcaggatatatctccttaagaagaagaactgggaaacgatggccgca
ataaaggagattgcgaagaggattggaattcactactctgaaataggtttcgccggaacc
aaggataggcatgctgtcacctatcaatacataagcatatgcagggaagttgacctagaa
aacgttgcaattaaagatgtaaccttaaggttcgtagggtatggaaggccgttgaagctt
ggtctccttttaggcaatttttttaagataagggttagagatactactccggagctcttg
ccaaacattttaaaggaggccaaggaaaaaggagggtttcccaattattttggtattcaa
aggtttggagaaaagaggagcgttaatcacatagttggcaagttactcctcctgggaaaa
tatgaagaagcagctgaggtcttcctgggttaccctggaaatgggatggaaggtgatgaa
gccaggaaaaaattcctggaaactaagaacgttgatctagccttagaagagtttccaaag
tttttgagatatgagagggcaatgctctataaatacagggaaactgggagctggaagaga
tccttcttagccctcccgaggccaatactcaggatatttatccacgcatttcagtcttac
ctctttaacctctacatctcaaggagaatcgaagaaggatttccgctaaacgaggcactt
cctggggatatagttgttcaagttaagaaggggattccgctaagggataggacgtataga
gttacagaatcaaatttagactttgtcaatgaaaaaataatgcagggagaagcaatggtt
tctggtccaatatttggatattcctataggagatctcatgggatcccaggaagattagag
gatgaaatattggaggaagctggagtaagcttagagaactttaagaggttgccaaagcca
atgagggagcctggagggaggagggaattgttgataaaacctaggggattcagatacaaa
actgagggaagggatgttttgtttaagtttttcctcccgaagggggtttacgctacaagc
gttttgagggagataataaaacctacttga
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