Pyrococcus horikoshii: PH1545
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Entry
PH1545 CDS
T00014
Symbol
PH1545
Name
(GenBank) 907aa long hypothetical DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
pho
Pyrococcus horikoshii
Pathway
pho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PH1545 (PH1545)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pho03021
]
PH1545 (PH1545)
Enzymes [BR:
pho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PH1545 (PH1545)
Transcription machinery [BR:
pho03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PH1545 (PH1545)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
AP_endonuc_2
TetR_C_24
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
BAA30656
UniProt:
O59227
LinkDB
All DBs
Position
complement(1373234..1375957)
Genome browser
AA seq
907 aa
AA seq
DB search
MHSVKKVIGSIEFGILSPQEIRKMSAVEVTVPDTYDDDGYPIEGGVMDKRMGVIDPGLRC
ETCGAKAGECPGHFGHIELARPVIHVGFAKTIHRILESTCRECGRIKLTDEEIEEYMKKL
ELAKNRRSEVNKILKEIHKKARERMVCPHCGAPQYPIKFEKPTIYWELRKDEQGNEYKHR
MMPTEIRDRLEKIPDKDLPLLGLHPEKSRPEWMVLTVLPVPPVTVRPSITLETGIRAEDD
LTHKLVDIIRINNRLRQNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGVPPAKHKSGRP
LKTLAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPIQIAMELTVPEKVT
EFNIEKLRKMVLNGPDKYPGANYVIDPEGRRIRIMESNKENLAKMIDIGWTVERHLVDGD
IVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPIIGGIQDHISGGYLLTREGAYFTREEVEQMLMFAGVDIKEL
PEPDKYENGKPLWSGKTIFSLLLPDDLTVWYRNKLCDEEEKCEALEKLIEEKLIPDPEEV
RKLAYDGFVYIQNGKLLSGAIDKKAYGREDGIILDLIVREYGVERARQFLDQVTKLTIWV
ITHKGFTTGIDDEDLPEEARDRIREIIREAEERVQRLIEAYKRGELEPLPGKSLEETLES
KIMAVLAEARDNAGSVAEKYLGMNNHAVIMAKTGARGKILNITQMAALLGQQSIRGRRLY
RGFKGRVLSHFKPGDLGARAKGFVVNSYKSGLSPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGVIVQFRYGEDGVDPMKSWGGKTVDVDRVIVRTLIK
MRSNGKK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcactcagttaagaaggttataggtagtattgaatttggaatactttcccctcaagaa
attaggaaaatgagtgccgttgaggttaccgttccagacacctacgatgatgacggttat
ccaattgaaggcggagtaatggataagagaatgggtgtcattgacccaggattaaggtgt
gaaacctgtggagctaaagctggggaatgtcctggtcattttggtcatatcgagcttgca
aggcccgtaattcatgtagggtttgctaagacgattcataggatcctcgagagtacctgt
cgtgagtgcgggaggataaagctcacagacgaggaaatagaagagtacatgaagaaactt
gagctagctaagaataggagaagtgaggtcaacaagatacttaaggagattcataagaag
gctagggagagaatggtatgcccccattgtggtgctccacagtatccaataaagtttgag
aagccaaccatatattgggagctcaggaaggatgagcaggggaatgaatacaagcataga
atgatgcccactgagattagggataggcttgaaaagattccggataaggatcttcctctc
cttggccttcatccagagaagtcaagacctgaatggatggttcttacagttcttccagtt
cctcctgttacagtaagaccttccataacgctagaaactggaatcagggccgaggatgac
cttacgcacaagcttgttgacataataaggataaacaatagattaaggcaaaatatagaa
gccggggctccccaacttatcattgaggacctctgggatcttctccagtatcacgttaca
acgtacataaacaatgaaacctctggagttcctccagctaagcataagagtggtaggcct
ctcaagaccctagctcagaggcttaaaggaaaggaaggaagatttagaggtaaccttagt
ggtaagagagttaacttttcagctagaactgtgataagccctgatccaatgataagtatc
aatgaagttggtgttccaatacaaatagcaatggaactcacggttcctgagaaggttacg
gaattcaacattgaaaagctgagaaagatggttctgaatggtcccgataagtatcctggg
gccaactatgtaatcgatccagagggaagaaggataaggataatggagagcaacaaagaa
aatctagccaagatgatagacattggctggactgttgagagacatttggttgatggagat
atagtgttattcaacagacaaccctcactccacagaatgtccatcatggcccacagagtt
agggtaatgccctacaaaacattcagacttaacctagcggtgtgtccaccttataatgct
gatttcgatggagatgagatgaaccttcacgttccgcagaccgaggaagctcaggccgaa
gctaagatcctaatggaggttcagaaccatataatctccccaaggtacggtgggccgatc
atcggtggtattcaggatcacatctcgggaggttacctgctaactagggagggagcttac
tttaccagggaagaagttgagcaaatgctaatgttcgcaggggttgacataaaagaattg
cctgagcctgacaagtatgagaatggaaagcccttatggagcggtaagacgatattctcg
ctacttcttcctgatgaccttaccgtttggtataggaataagctctgtgatgaagaggag
aaatgtgaggcattagaaaagctaattgaagaaaagctcataccagatccggaagaagtt
agaaagctagcctatgatggcttcgtctacatccaaaacggtaagctactaagtggtgcg
attgataagaaagcttatggaagggaagatggtataatactcgatttgatcgttagagag
tatggagttgagagggctagacagttcctggatcaggttactaagcttacaatatgggtt
attactcacaagggcttcacaactggaatagatgacgaagatcttcctgaggaggctaga
gatagaattagagaaattataagggaagctgaagaaagagttcaaagattaatagaagct
tacaagagaggagaacttgagcccctcccaggaaagtccctagaagaaacattagagagt
aagatcatggccgtcttagctgaagctagagataacgcaggttccgtagctgagaagtat
ctcggtatgaataatcatgcagtaataatggcgaagactggagctagaggtaagatactt
aacataactcagatggcagctttgcttggtcaacagtcgattagagggagaagactttac
agaggtttcaaggggagggttctcagtcactttaagccgggagatttaggggctagagca
aaaggtttcgtcgtaaattcctataagagcggcctaagtccccaggaatacttcttccat
gcaatgggtggtagagagggtctcgtagatactgctgttagaactgctcagagtggttat
atgcagaggagactcatcaatgctctccaggatcttaaggttgactatgatgggacggta
agggatccaacaggagtaatagttcagttccgctatggagaggatggagttgatccaatg
aagagttggggtggaaagaccgttgatgttgatagggttattgtgagaaccttaatcaag
atgagatccaacggaaagaagtga
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