Pyrococcus horikoshii: PH1584
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Entry
PH1584 CDS
T00014
Symbol
PH1584
Name
(GenBank) 417aa long hypothetical eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
pho
Pyrococcus horikoshii
Pathway
pho03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PH1584 (PH1584)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pho03019
]
PH1584 (PH1584)
03012 Translation factors [BR:
pho03012
]
PH1584 (PH1584)
Messenger RNA biogenesis [BR:
pho03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PH1584 (PH1584)
Translation factors [BR:
pho03012
]
Eukaryotic type
Release factors
PH1584 (PH1584)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
baeRF_family10
acVLRF1
HypA
DUF8105
TssR_VWA
zinc_ribbon_6
DUF5318
TetR_C_26
Zn_ribbon_8
zf-DNL
Motif
Other DBs
NCBI-ProteinID:
BAA30696
UniProt:
O59264
LinkDB
All DBs
Position
complement(1405939..1407192)
Genome browser
AA seq
417 aa
AA seq
DB search
MSKMTRHDAQLYELKKKIEELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIK
SKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEIEGNTDIRLWAIIPPEPLNVR
LYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIELLDELTSNVPGKTRAG
GQSARRYERIREQETHEFMKRIGEHANRAFLPLLEKGELKGIIIGGPGPTKEEFVEGEYL
HHELKKKILGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLAT
YGEREVRRALEIGAVDVLLISEGYNKVRVRVKCNHCGWEELKTMSEEEYEVYRKKITKCP
KCGSQNLTIEKWDVAEELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLGAILRFKI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaatgacacgtcatgatgctcaactttacgaattaaagaagaaaatagaggag
ctaaaaaagataaggggtcgagggactgagttgatatccctctatatccctgctggttat
gacctcagtaaggtcatgcaacagctcagggaggagtacagtacggcccaaaatataaag
tcaaaaacgacaaggaaaaacgttcttggggctctggaaagggcaatgcaacatttaaag
ctatataagcaaactccagaaaatggcttagccctttttgtgggtaacgttagtgaaata
gaaggaaatactgacatcaggctatgggcaataattccccccgaacccctaaacgtaaga
ctttatcgatgtgatcaaactttcgtcactgaacctcttgaagagatgcttagggttaag
gatgcttatggcttgataacggttgagaagaatgaagccaccatagggctacttaggggg
aaaagaatagaactacttgatgagctaacttctaatgtccctggaaagacgagggctggt
ggacagtcagctagacgttatgagagaattagagagcaagaaacgcatgaattcatgaag
aggattggtgaacatgcaaacagggcgtttcttcctttacttgaaaaaggagaactaaag
ggaattatcattggtggccctgggccgacgaaagaggagtttgttgaaggggagtaccta
caccacgagctcaagaagaagatacttggagtcgtggatataagctaccatggagagtac
gggcttagggaattagttgagaaggctagcgacatattgagagatcacgaggttattaga
gagaaaaaactagttaatgagtttcttaagcatgtagtaaaggatacggggcttgcaact
tacggtgagagggaagttaggagggcattagaaataggtgccgttgacgttctattaata
agtgaggggtacaacaaggttagggttagggttaagtgcaaccactgcggttgggaagag
ctgaagaccatgagcgaggaagaatacgaagtctataggaagaaaattactaaatgcccc
aagtgtggaagtcagaacttaacaatcgaaaagtgggatgttgcagaggagttaataaaa
atggcagaggaagcgggatcggatgtcgaaataatatccctagacactgaagaaggtcag
cagttctatagggcatttggtggcctcggggccatacttaggtttaagatttga
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