Pyrococcus horikoshii: PH1896
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Entry
PH1896 CDS
T00014
Symbol
PH1896
Name
(GenBank) 650aa long hypothetical ATP-dependent RNA helicase
Organism
pho
Pyrococcus horikoshii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_helicase_helical
ERCC4
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
SWI2_SNF2
ERCC3_RAD25_C
RMNT_CmcI
nSTAND3
DUF7021
Motif
Other DBs
NCBI-ProteinID:
BAA31019
UniProt:
O59524
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Position
complement(1648215..1650167)
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AA seq
650 aa
AA seq
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MNLMYIRKDLLQPRLYQELIYAKCKERNCLIVLPTGLGKTIIAMMIADYRLDKYGGKVLM
LAPTKPLVLQHAETFRKFFTLPPEKIVALTGEISPNERVRAWARAKVVIATPQTIENDLL
VGRISLEDVTLIIFDEAHRAVGNYAYVYIAKEYLKQAKNPHVIGLTASPGSTPEKIMEVL
RNLGIEHIEYRSENSPDVKPYVQGIKFEWVKVELPELYKEVRKLLRDMLRDSLKPLAEAG
LLDSTSADIPKKEILRAGQIINEEMAKGNHDLRKLLLFHAMALKLHHAIELLETQGLSAL
RVYLKRLYEEAKAGSTRASKELFLDKRMKKALALLIQAKELGIDHPKMEVLKGLIREQLK
RKENSKIIVFTNYRETAKKVVEELMKDGIKARRFVGQASRENDRGMSQKEQKLILDAFAR
SEFNVLVATSVGEEGLDVPEVDLVIFYEPVPSAIRSVQRRGRTGRQKPGRVVILMAQGTR
DEAYYWSSRQKEKIMRETIRMVSQMVRKERQLSLESYVKREVNEEIKEEKKETGGIKVVI
DSRELRSEVVKKLKTLGIKIEVRTLDVGDYIVSEDVAIERKSANDFIQSIIDGRLFDQVK
RLKEAYPRPVIIIEGQLYGIRNVHPNAIRGAIASIVLDFGVPVIFSSSSD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttgatgtacattagaaaggatctactacagccaaggctttatcaggagctaata
tacgcaaaatgcaaggaaaggaattgcttgatagttctaccgactgggttagggaagact
ataatagctatgatgatagcagattatcggttagataaatatggtgggaaagtcttaatg
ctcgcgcctacgaagcccctcgtccttcagcatgctgaaacctttagaaagttttttacc
ctaccccctgagaagatcgttgcgttaaccggtgagataagtcccaatgagagggttaga
gcttgggccagggcaaaagtcgtgatagctactccccaaaccattgaaaatgatttactt
gtaggaagaataagtttagaggatgtaacccttataatctttgacgaggcccatagagca
gtcggcaactatgcttacgtttatatagctaaggagtacttaaaacaggcaaaaaatcca
catgttataggcttaacggcttctcctgggagtactcctgaaaagataatggaggtattg
aggaacctcggaatagagcatatagaatacagatcggagaactccccagatgtaaagcct
tacgttcaggggataaagtttgaatgggttaaggttgagcttcccgagctatataaggaa
gttagaaagttactaagagatatgctaagggactcacttaaacctttagctgaggccggt
ttgttggattccacatcagcggatattccaaagaaggaaatactaagggcgggtcaaata
ataaatgaagaaatggccaaggggaatcacgatctaaggaaacttttgctgtttcatgca
atggccctgaagttgcatcatgcaatagagttactcgaaactcaggggttatccgctttg
agggtttatctaaagaggctgtatgaagaagctaaggctggttctactagagcaagcaag
gagttattcttggataaaagaatgaaaaaggccttagccttattgattcaggcaaaggaa
ctgggcatcgatcatcccaagatggaggttttgaaggggcttataagggagcagctgaag
aggaaggagaactccaagataatagtattcactaactatagggagaccgctaaaaaggtt
gttgaagaacttatgaaggatggtataaaagctagaagatttgtgggtcaagcaagtagg
gaaaatgatagggggatgagtcagaaagagcaaaaattaatattagatgcttttgcaagg
agtgaattcaatgttttggtcgcaactagtgttggtgaagaaggtttggatgttccagag
gttgatctcgtcatattctatgaaccggttccttcagcaataaggagcgttcagaggagg
ggaagaactggaaggcagaaaccggggagggttgtgatactcatggcccagggtacgagg
gatgaagcctactactggagctcaagacagaaggagaaaataatgagagagaccataagg
atggtaagccaaatggttaggaaggagaggcaattatccttggaatcgtatgttaagagg
gaagttaatgaagaaataaaggaggagaaaaaagaaactggagggattaaagtcgttata
gatagtagggagcttagaagtgaggttgttaagaagcttaaaacccttggaatcaaaatt
gaggttagaaccctggatgttggggattatatagttagtgaggatgttgccatagaaagg
aagtctgcgaatgacttcattcagtcgataattgatggtagactattcgatcaagttaaa
agacttaaggaggcgtatcctaggcctgtaattataatcgaaggtcagctctacggaatt
aggaatgttcatccaaacgccataaggggggccatagcatcgatagttctcgattttggg
gttcccgtaatattctcttctagttcagattag
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