Pyrococcus horikoshii: PH1908
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Entry
PH1908 CDS
T00014
Symbol
PH1908
Name
(GenBank) 188aa long hypothetical DNA-directed RNA polymerase subunit E
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
pho
Pyrococcus horikoshii
Pathway
pho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PH1908 (PH1908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pho03021
]
PH1908 (PH1908)
Enzymes [BR:
pho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PH1908 (PH1908)
Transcription machinery [BR:
pho03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PH1908 (PH1908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
S1_RRP5
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
BAA31033
UniProt:
O59571
LinkDB
All DBs
Position
1660531..1661097
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AA seq
188 aa
AA seq
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MYKIVTVKDVVRIPPRMFTMDPKEAAMLVLRDTYEGTYDRDEGVILSIVEVKEVGDGIIV
PGDGATYHEVVFDVLVWEPKRDEVVEGTVVDVVPFGAFIRIGPMDGLVHISQLMDDYVVY
DERNKQFVGKEKKYLLKIGDAVRARIITVSPKSRVIRENRIGLTMRQPGLGKFEWIEKEK
RKEKEGKK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaatagtgacggtgaaggatgtcgtaaggataccgcccaggatgttcacgatg
gatccaaaggaagccgcaatgttagtcctcagagatacctatgaggggacatacgacagg
gatgaaggtgtaatcctttcaatcgttgaggtaaaggaggttggagatggaataatagtt
ccaggggatggggcaacttaccatgaagtagtattcgacgtcctcgtttgggaaccgaag
agagatgaggttgtagagggcaccgtagttgacgtcgtcccctttggagcatttataagg
attgggcctatggatggattggtccacatcagccaactcatggatgactacgtagtctac
gacgagagaaacaagcagtttgtagggaaagagaagaagtatcttttaaagatcggagat
gctgttagggccaggataatcaccgtaagtccaaagagtagggtaataagagaaaataga
attgggttaacgatgagacagccaggacttggaaagtttgagtggatcgagaaggaaaag
agaaaggaaaaggagggtaagaagtga
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