Pyrococcus horikoshii: PH1947
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Entry
PH1947 CDS
T00014
Symbol
PH1947
Name
(GenBank) 1235aa long hypothetical DNA-directed DNA polymerase
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
pho
Pyrococcus horikoshii
Pathway
pho03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PH1947 (PH1947)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pho03032
]
PH1947 (PH1947)
Enzymes [BR:
pho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PH1947 (PH1947)
DNA replication proteins [BR:
pho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
PH1947 (PH1947)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
PI-TkoII_IV
DNA_pol_B_exo1
Intein_splicing
DNA_pol_B_exo2
LAGLIDADG_3
RNase_H_2
HTH_Crp_2
LamB_YcsF
Motif
Other DBs
NCBI-ProteinID:
BAA31074
UniProt:
O59610
LinkDB
All DBs
Position
1686361..1690068
Genome browser
AA seq
1235 aa
AA seq
DB search
MILDADYITEDGKPIIRIFKKENGEFKVEYDRNFRPYIYALLRDDSAIDEIKKITAQRHG
KVVRIVETEKIQRKFLGRPIEVWKLYLEHPQDVPAIRDKIREHPAVVDIFEYDIPFAKRY
LIDKGLTPMEGNEKLTFLAVDIETLYHEGEEFGKGPVIMISYADEEGAKVITWKKIDLPY
VEVVSSEREMIKRLIRVIKEKDPDVIITYNGDNFDFPYLLKRAEKLGIKLLLGRDNSEPK
MQKMGDSLAVEIKGRIHFDLFPVIRRTINLPTYTLEAVYEAIFGKPKEKVYADEIAKAWE
TGEGLERVAKYSMEDAKVTYELGREFFPMEAQLARLVGQPVWDVSRSSTGNLVEWFLLRK
AYERNELAPNKPDEKEYERRLRESYEGGYVKEPEKGLWEGIVSLDFRSLYPSIIITHNVS
PDTLNREGCEEYDVAPKVGHRFCKDFPGFIPSLLGQLLEERQKIKKRMKESKDPVEKKLL
DYRQRAIKILANSILPDEWLPIVENEKVRFVKIGDFIDREIEENAERVKRDGETEILEVK
DLKALSFNRETKKSELKKVKALIRHRYSGKVYSIKLKSGRRIKITSGHSLFSVKNGKLVK
VRGDELKPGDLVVVPGRLKLPESKQVLNLVELLLKLPEEETSNIVMMIPVKGRKNFFKGM
LKTLYWIFGEGERPRTAGRYLKHLERLGYVKLKRRGCEVLDWESLKRYRKLYETLIKNLK
YNGNSRAYMVEFNSLRDVVSLMPIEELKEWIIGEPRGPKIGTFIDVDDSFAKLLGYYISS
GDVEKDRVKFHSKDQNVLEDIAKLAEKLFGKVRRGRGYIEVSGKISHAIFRVLAEGKRIP
EFIFTSPMDIKVAFLKGLNGNAEELTFSTKSELLVNQLILLLNSIGVSDIKIEHEKGVYR
VYINKKESSNGDIVLDSVESIEVEKYEGYVYDLSVEDNENFLVGFGLLYAHNSYYGYYGY
AKARWYCKECAESVTAWGRQYIDLVRRELEARGFKVLYIDTDGLYATIPGVKDWEEVKRR
ALEFVDYINSKLPGVLELEYEGFYARGFFVTKKKYALIDEEGKIVTRGLEIVRRDWSEIA
KETQARVLEAILKHGNVEEAVKIVKDVTEKLTNYEVPPEKLVIYEQITRPINEYKAIGPH
VAVAKRLMARGIKVKPGMVIGYIVLRGDGPISKRAISIEEFDPRKHKYDAEYYIENQVLP
AVERILKAFGYKREDLRWQKTKQVGLGAWIKVKKS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggatgctgattatataaccgaagatggcaaaccgataattaggatatttaaa
aaagaaaatggtgagtttaaagtcgaatacgacaggaattttaggccatatatttacgcc
ctccttagagatgactctgcgatagacgaaataaagaagatcacggcccaaagacatgga
aaagttgtgagaattgtagaaaccgagaagattcaaagaaaatttttgggaaggccaata
gaagtgtggaagctctaccttgagcatccccaagacgttcccgctataagggataagata
agagagcatccagcggttgttgatatttttgagtacgatattccatttgcaaaaagatac
ctcatagacaagggattgactccaatggaaggaaatgaaaagctaacttttctagcggtt
gacatagaaactctctatcatgaaggggaggaatttggaaagggtcccgtgataatgatt
agctatgctgacgaagagggagcaaaggtaataacttggaaaaaaattgatctaccttat
gttgaagttgtttcgagcgaaagggaaatgataaagaggctaattagggtaattaaggag
aaagatccggatgtaataatcacttacaacggtgataactttgactttccatacctccta
aagagggctgaaaagctcggtataaagctcctccttggaagggataatagcgagccaaaa
atgcagaaaatgggtgactctctagcggtagagataaaagggagaatacactttgatctc
ttccctgtgatacggagaacaataaacttgccaacttacacacttgaagcggtttacgag
gccatatttggtaagccgaaggagaaggtatatgcagatgagattgcaaaggcctgggaa
actggggaaggactcgagagagttgcaaagtactcaatggaggacgccaaggtaacttac
gagctcgggagagagttctttccgatggaagcccagctcgcaaggctcgtcggacaacca
gtttgggatgtttctagatccagtacaggaaacttagttgagtggttcctcctcagaaaa
gcatatgaaaggaacgagctagcccctaacaagccagatgaaaaggagtatgagagaagg
ctaagggaaagttacgagggaggatatgtaaaggagccagaaaagggattatgggaggga
atagtaagcttagacttccgcagtctatatccctcaataataataacccacaacgtttct
cccgataccctcaaccgagaaggatgcgaggaatatgacgtggctcccaaggtaggacac
cgcttctgtaaagactttccagggttcattccaagtctacttggtcagctactcgaagaa
aggcaaaagatcaagaagagaatgaaggagagcaaagatcccgttgagaaaaagctcctc
gactacaggcaacgggctatcaagatcttagcaaacagcattttaccagatgaatggctc
ccaattgttgaaaatgaaaaagttcgattcgtaaaaattggagacttcatagatagggag
attgaggaaaacgctgagagagtgaagagggatggtgaaactgaaattctagaggttaaa
gatcttaaagccctttccttcaatagagaaacaaaaaagagcgagctcaagaaggtaaag
gccctaattagacaccgctattcagggaaggtttacagcattaaactaaagtcagggaga
aggatcaaaataacctcaggtcatagtctgttctcagtaaaaaatggaaagctagttaag
gtcaggggagatgaactcaagcctggtgatctcgttgtcgttccaggaaggttaaaactt
ccagaaagcaagcaagtgctaaatctcgttgaactactcctgaaattacccgaagaggag
acatcgaacatcgtaatgatgatcccagttaaaggtagaaagaatttcttcaaagggatg
ctcaaaacattatactggatcttcggggagggagaaaggccaagaaccgcagggcgctat
ctcaagcatcttgaaagattaggatacgttaagctcaagagaagaggctgtgaagttctc
gactgggagtcacttaagaggtacaggaagctttacgagaccctcattaagaacctgaaa
tataacggtaatagcagggcatacatggttgaatttaactctctcagggatgtagtgagc
ttaatgccaatagaagaacttaaggagtggataattggagaacctaggggtcctaagata
ggtaccttcattgatgtagatgattcatttgcaaagctcctaggttactacataagtagc
ggagatgtagagaaagatagggtgaagttccacagtaaagatcaaaacgttctcgaggat
atagcgaaacttgccgagaagttatttggaaaggtgaggagaggaagaggatatattgag
gtatcagggaaaattagccatgccatatttagagttttagcggaaggtaagagaattcca
gagttcatcttcacatccccaatggatattaaggtagccttccttaagggactcaacggt
aatgctgaagaattaacgttctccactaagagtgagctattagttaaccagcttatcctt
ctcctgaactccattggagtttcggatataaagattgaacatgagaaaggggtttacaga
gtttacataaataagaaggaatcctccaatggggatatagtacttgatagcgtcgaatct
atcgaagttgaaaaatacgagggctacgtttatgatctaagtgttgaggataatgagaac
ttcctcgttggcttcggactactttacgcacacaacagttattacgggtattatggttat
gcgaaagctagatggtactgcaaagagtgcgcagaaagcgttacggcatgggggaggcaa
tacatagatttagttaggagagaacttgaagctagaggatttaaagtcctgtatatagac
acggatggactctacgcgactattcctggggttaaggactgggaagaggttaaaaggagg
gccttagagttcgtagactatataaactccaagctcccaggagttctcgaactcgaatat
gagggcttttacgcaagggggttcttcgtcacaaagaagaagtatgccctgatagatgag
gaaggaaagatagtgacaagaggtctagagatagttaggagggactggagtgagatagca
aaggagacccaagcaagagttttagaggccatactcaagcacggtaatgttgaagaggcc
gtcaagatagttaaggatgtaaccgaaaagctgacaaattatgaagttcccccagaaaag
ctggtcatatacgagcagataacgaggccaataaatgaatacaaggcaatagggccccac
gtagccgtggcaaagaggcttatggccaggggaatcaaggtgaaacctgggatggtgata
gggtacatagtcctcaggggtgatggcccgataagtaagagggctatctcaatagaagaa
ttcgatcccaggaagcataaatacgacgccgaatactacatagagaaccaagtcttacct
gccgttgaaagaatactcaaagcttttgggtacaaaagggaagaccttaggtggcagaaa
acaaaacaagtgggattaggagcatggatcaaggtcaagaagtcttaa
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