Paracoccus homiensis: ACLISE_01700
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Entry
ACLISE_01700 CDS
T11345
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phoi Paracoccus homiensis
Brite
KEGG Orthology (KO) [BR:
phoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phoi03032
]
ACLISE_01700 (topA)
03400 DNA repair and recombination proteins [BR:
phoi03400
]
ACLISE_01700 (topA)
Enzymes [BR:
phoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACLISE_01700 (topA)
DNA replication proteins [BR:
phoi03032
]
Prokaryotic type
DNA Topoisomerases
ACLISE_01700 (topA)
DNA repair and recombination proteins [BR:
phoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACLISE_01700 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XMR59168
LinkDB
All DBs
Position
complement(332548..335244)
Genome browser
AA seq
898 aa
AA seq
DB search
MPVVVVESPAKAKTIEKYLGGDYRVLASFGHVRDLPPKDGSVDPDADFAMKWEVASDSKK
HLKAIKDALKDDQNLILATDPDREGEAISWHLLEALQSSLKKTSEVSRVTFNAITKPAVT
EAMKQPRQIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVDRE
MEIEAFKPREYWSVHARLATPDGDEYDATLTSLAGAKLDRYDLPDAEKAAMAVSAVSSRD
LKVTGVTAKPASRNPWPPFMTSTLQQEASRKMGMGAKACMSAAQRLYEAGLITYMRTDGI
DMAPEAVHAARDAIKAKFGDNYVPKSPRMYKNKAKNAQEAHECIRPTDMMLSPDKLKVSA
EDQRRLYDLIWKRTIASQMEAARMERTTVEIASPDNQVGLRATGQVMLFDGFLKVYDQGR
DDDEGEDSARLPAIAEGEAAKLVPKAFEPELAKARDKGGDLPDAPATQLAAPGMLADHAA
STAGRQHFTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDRDYVRKDKNRLIPEDK
GRLVTTFLVKYFPRYVSYDFTADLENELDEISAGDLVWREVLGRFWKDFSKALEGTSELR
ITEVLDAIDEALAPHLYPPRPDGSDPRVCPLCGQGRLNLKTARSGGAFIGCTNYPDCRFT
RPLSAPDGEEPVGDRVLGHDGGDEISLKTGRFGPYIQRGEATEEQPKPPRASIPKGWDAG
SVDLEKALQLLSLPRPVGNHPEDGELVEAGIGRYGPYVKHGPKYANLPDVDEVFTIGMNR
AVEVLAAKQTRGRAAAAAPLKELGDHPDGGKIQVMNGRYGPYVKWEKINATLPRDVTPED
ITPEQALELIAAKAAKKGTRKPAAKKTAAKKPAAKKTTAKKTTAKKAATKKADDKTDE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgtcgtcgtcgaatctccggcaaaagccaaaaccatcgagaaatatctgggt
ggcgattatcgcgtgctggccagtttcggccatgtccgcgacctgccgcccaaggatggc
agcgtcgatccggacgccgatttcgccatgaaatgggaagtcgccagtgacagcaagaaa
cacctgaaggcgatcaaggatgcgctgaaggacgaccagaacctgatcctggccaccgac
cccgaccgcgagggcgaggcgatcagctggcacctgctggaggcactgcaatcctcgctg
aagaagaccagcgaggtcagccgcgtcactttcaacgccatcaccaagcccgccgtcacc
gaggcgatgaagcagccccgtcagatagatcaggcgctggtcgatgcctatctggcacgc
cgcgcgctggattatctggttggcttcaatctgtcgccggtcctgtggcgcaagctgccc
ggtgcgaaatcggcgggccgcgtgcagtcggtctgcctgcggctgatcgtcgaccgggaa
atggagatcgaggccttcaagccgcgcgaatactggtcggtccatgcccgtctggccacg
cccgacggcgacgaatacgacgccacgctgacctcgctggccggggccaagctggaccgc
tatgatctgcccgatgccgaaaaggccgcgatggccgtcagcgcggtctccagccgcgac
ctgaaggtgacgggcgtcaccgccaagccggccagccgcaatccatggccgcccttcatg
acctcgaccctgcagcaggaggccagccgcaagatgggcatgggcgccaaggcctgcatg
tcggcggcgcagcgcctctacgaggccgggctgatcacctatatgcggaccgacggcatc
gacatggcccccgaggccgtccatgccgcccgtgatgcgatcaaagccaagttcggcgac
aactacgtcccgaaaagcccgcgcatgtacaagaacaaggccaagaacgcgcaggaagcc
cacgaatgtatccgcccgaccgacatgatgctgtcgcccgacaagctgaaggtctcggcc
gaggatcagcgccgcctgtacgacctgatctggaagcgcaccatcgccagccagatggaa
gccgcccggatggagcgcacgacggtcgagatcgccagccccgacaaccaggtcggcctg
cgcgccaccggtcaggtgatgctgttcgacggcttcctgaaagtctatgatcagggccgc
gacgatgacgagggcgaagacagcgcccgcctgcccgccattgccgagggcgaggccgcg
aaactggtccccaaggcgttcgaaccggaactggccaaggcccgcgacaagggcggcgac
ctgcctgatgcgcccgcgacccagctggccgcgcccggcatgctggccgatcacgccgca
tccaccgcgggccgtcagcatttcacccagccgcccccgcgctataccgaggcgacgctg
gtcaagcgcatggaagaactgggcatcggccgtccctcgacctatgccagcatcgtcacg
acgattcaggaccgcgactatgtccgcaaggacaagaaccgcctgatccccgaggacaag
ggccgtctggtgacgacctttctggtgaaatacttcccgcgctatgtcagctatgacttc
accgccgatctggaaaacgaactggatgagatcagcgccggcgatctggtctggcgcgag
gttctgggccggttctggaaggatttttccaaggcgctggaaggcacgtcggaactgcgc
atcaccgaggtgctggacgccatcgacgaagcgctggccccgcatctgtacccgccccgc
ccggatggcagcgacccgcgcgtctgcccgctttgcggtcaggggcgtctgaacctgaaa
accgcgcgttcgggcggcgccttcatcggttgcacgaattaccccgactgccgctttacc
cgccccctgtctgcccccgatggcgaggaaccggtgggcgaccgtgtgctggggcatgac
ggcggcgacgagatcagcctgaagaccgggcgcttcggcccctatatccagcgcggcgag
gcgaccgaggaacagcccaagccgccgcgtgcctcgatcccgaaagggtgggacgcgggc
agtgtcgatctggaaaaggcgctgcagttgctgtccctgccgcgtcccgtgggcaatcac
cccgaagatggcgaactggtcgaggccgggattggccgctatggcccctacgtcaagcac
ggcccgaaatatgcgaacctgcccgatgtcgatgaggtctttaccatcggcatgaaccgc
gcggtcgaggttctggccgcgaaacagacccggggccgggcggcggccgccgcgccgctg
aaggaactgggcgaccaccccgatggcggcaagattcaggtgatgaacggccgctatggc
ccctatgtgaagtgggaaaagatcaacgcgaccctgccgcgcgatgtcacccccgaggac
atcacccccgaacaggcgctggaactgattgccgcgaaggccgccaagaagggcacgcgc
aagcctgccgccaagaagacggcggcgaaaaagcccgcggccaagaagaccacggcgaag
aaaacgaccgccaagaaggccgcgaccaagaaggcggacgacaagaccgacgaatga
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