KEGG   Paracoccus homiensis: ACLISE_09020
Entry
ACLISE_09020      CDS       T11345                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
phoi  Paracoccus homiensis
Pathway
phoi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phoi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACLISE_09020
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:phoi02022]
    ACLISE_09020
Two-component system [BR:phoi02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   ACLISE_09020
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 VpsR MCM Mg_chelatase AAA cREC_REC OKR_DC_1_N AAA_16 FleQ nSTAND3 AAA_2 AAA_22 NPHP3_N
Other DBs
NCBI-ProteinID: XMR58013
LinkDB
Position
complement(1769364..1770755)
AA seq 463 aa
MSDILIVDDERDIRELVADILKDEGFATRTAANSDEAVTALNDEEPALMILDIWLKDSRM
DGIDILKQVKRNNPDVPVIIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVINRAME
TSRLRRENSSLKRGGTQLGEMLGQSPAFKRLRDNLDKVAKSNGRVMLSGEPGSGKEMAAR
YIHAHSPRANAPFITVPCATIEPDRMEEVLFGRESSDRGVEPGLLEQAHGGVIYFDEVGD
MPTGTQSKILRVLTEQQFARAGGSDRVRVDLRVISSTNRDLPAEIAAGRFRQELFDRLNV
VPIVVPSLAERREDIAALAHHFIDYCQQTQGLAARELPDETVAALQSMRWPGNIRQLRNV
IERVLILAEESGPIQPAELEPQGATPDNSDVLSLGPQVTAMPLREAREMFEREYLLAQIN
RFGGNISRTAQFVGMERSALHRKLKSLGVVGGMRGEDELVTGK
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgagtgacattctgatcgtcgatgacgaacgcgacatccgcgaactggtggccgatatc
ctgaaggacgaaggctttgcgacccgcacggcggccaattccgacgaggccgtcaccgcg
ctgaacgacgaggaaccggcgctgatgatcctagatatctggctgaaggacagccggatg
gacgggatcgatatcctgaaacaggtcaagcgcaacaatcccgacgtgccggtgatcatc
atctcggggcatggcaatatcgaaatcgcggtcgcggcgatcaagcagggcgcctatgac
tttatcgaaaagccgttcaatatcgaccagttgatggtggtcatcaaccgggcgatggaa
accagccgcctgcgtcgcgaaaacagcagcctgaaacgcggtggcacgcaattgggcgaa
atgctgggccagtcgcccgccttcaagcggctgcgcgacaatctggacaaggtggccaaa
tccaacgggcgtgtgatgctgtcgggcgagccgggcagcggcaaggaaatggccgcccgc
tatatccatgcccacagcccgcgtgcgaatgccccgttcatcaccgtgccctgcgccacg
atcgaacccgaccgcatggaagaggttctgttcggccgcgaaagcagcgatcgcggggtc
gagccgggccttcttgaacaggctcatggcggcgtgatctatttcgacgaggtcggcgac
atgcccaccggcacgcaatccaagatcctgcgtgtgctgacggaacagcaattcgcgcgg
gccggcggttcggaccgggtgcgtgtcgatctgcgggtgatttcctcgaccaaccgcgat
ctgcctgccgaaatcgccgcgggtcggttccggcaggaattgttcgaccggctgaacgtg
gtgccgatcgtggtgccctcgctggccgaacggcgcgaggatatcgccgcgctggcccat
catttcatcgactattgccagcagacgcaggggcttgccgcgcgcgaactgccggatgaa
acggtcgccgcgctgcaatccatgcgttggccgggcaatatccggcagttgcgcaacgtg
attgaaagggtgctgatcctggccgaggaaagcggcccgatccagcctgccgaactggaa
ccgcagggcgcgacgcccgacaacagcgatgtgctgagccttgggccgcaggtcaccgcc
atgccgctgcgcgaggcgcgcgagatgttcgagcgggaatatctgctggcccagatcaac
cgtttcggcggcaatatcagccgcaccgcgcaattcgtcgggatggaacgcagcgccctg
caccgcaagctgaaatcgcttggcgtggtgggtggtatgcgcggcgaggatgagctggtg
accggcaagtaa

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