Paracoccus homiensis: ACLISE_10890
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Entry
ACLISE_10890 CDS
T11345
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
phoi Paracoccus homiensis
Pathway
phoi00550
Peptidoglycan biosynthesis
phoi01100
Metabolic pathways
phoi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
phoi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACLISE_10890 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACLISE_10890 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phoi01011
]
ACLISE_10890 (mrdA)
Enzymes [BR:
phoi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACLISE_10890 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
phoi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACLISE_10890 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Ig_Actino
DUF8839
Motif
Other DBs
NCBI-ProteinID:
XMR58354
LinkDB
All DBs
Position
complement(2140863..2142809)
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AA seq
648 aa
AA seq
DB search
MKRSPQDIQASSRLVTRRGLMLGGIQLGVIGGLGMRLRSMQLDHADEYRMLSDGNSIKIR
LLPPARGLIHDRHGALIAGNEQNYRVTLTREEAGGDVAQVLRRLSRLIPLSEQRIDELME
EFSKRSAVTPIVLADRLSWEQFGSIAVNAPALPGVTPESGLSRVYPRAGDLAHVLGYVGP
VSDYDLSKIEEPDPVLMLPEFQLGKVGVESKLEESLRGKAGARRVEVNSAGREMRELGRQ
EGQQGATVQLTIDAALQNYAAQRMGEESAAAVVMDVQTGELVAICSSPSFDPNKFVRGIS
STDYKALMGHDHRPLADKTVQGVYPPGSTFKMVTLLAGLESGVINGGSRFYCPGDTEVGG
RRFHCWRRGGHGMMDAVQSLEQSCDVYYYELSQRVGIDRIAAMARKLGVGVHHDLPMSAV
AEGIAPDRAWKKARYDQDWQIGDSLNASIGQGYVLASPLQLAVMTARIASGKVIQPRLIR
AIDGVPQVAPEFEDLDINPLNLRQARAGMDAVMNGSRGTASRSRILPDEWRMAGKTGTSQ
VRNITAAERARGVIRNDQLPWNRRDHALFVCYAPYEAPRYACSVVVEHGGGGSTAAAPIA
RDIMLFALAGGLPPLDAVPSGERAAMEERHNAMHLYTPTPPQPGRSRA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctcgccccaggatattcaggccagcagccgtctggtgacgcgtcgcgggctg
atgctgggcggcattcagttgggcgtgatcggcgggctgggaatgcggcttcgctcgatg
cagttggatcatgcggatgaataccggatgctgtctgacggcaattcgatcaagatccgg
ctgctgccgcctgcgcgggggctgatccatgatcggcatggggcgctgatcgcgggcaat
gaacagaattaccgcgtcaccctgacccgcgaagaggcgggcggcgatgtggcgcaggtt
ctgcgccgcctgtcgcgcctgatcccgctgagcgagcagcgcatcgacgagctgatggaa
gaattttccaaacgcagcgcggtcacgccgatcgttctggcggatcgcctcagctgggaa
cagttcggctcgatcgcggtgaatgcgcccgcgctgccgggggtgacgccggaatcgggc
ctgtcgcgggtttacccccgtgcgggcgatctggcgcatgtgctgggctatgtcggcccg
gtgtccgattacgatctgtccaagatcgaggaacccgacccggttctgatgctgcccgag
tttcagttgggcaaggtcggggtcgaatccaagctggaagaatcgctgcgcggcaaggcc
ggtgcacggcgggtcgaggtgaacagcgccgggcgcgagatgcgcgagctgggccggcag
gaaggtcaacagggcgcgaccgtgcaactgaccatcgacgccgccttgcagaactatgcc
gcgcaacgcatgggcgaggaaagcgccgctgccgtggtgatggatgtccagaccggcgaa
ctggtcgcgatctgttcctcgcccagcttcgatccgaacaaattcgtgcgcgggatttca
tcgaccgattacaaggcgctgatggggcatgaccaccgccccttggccgacaagacggtt
cagggcgtctatccgccgggctcgaccttcaagatggtgacgctgcttgcagggctggag
tccggcgtcatcaatggcggttctcggttctactgccccggcgataccgaggtcggcggc
cgtcgctttcactgctggcggcggggcgggcatggcatgatggatgccgtccaaagcctg
gagcaaagctgcgacgtctattattacgaactgtcgcaacgtgtcggcatcgaccgcatc
gccgccatggcccgcaagctgggcgtgggggtgcatcacgatctgccgatgtccgccgtg
gccgaagggatcgcgccggaccgggcctggaagaaggcgcgctatgatcaggactggcag
atcggtgacagcctgaacgcctcgatcgggcagggttatgtgctggcctcgccgctgcaa
ctggcggtgatgacggcacggatcgcctcggggaaggtgatccagccgcggctgatccgg
gccatcgatggtgtgccgcaggtggccccggaattcgaggatctggacatcaatccgctg
aacctgcgtcaggcgcgcgcagggatggacgcggtgatgaacggcagccgcggcacggcc
tcgcggtcgcggatcctgccggatgagtggcggatggcgggcaagaccggtaccagccag
gtgcgcaacatcaccgccgcggaacgcgcgcgcggcgtcatccgcaacgatcagctgccg
tggaaccggcgcgatcacgcgctgttcgtctgctatgcgccctatgaggcgccgcgctat
gcctgctcggtcgtggtggaacatggtggcggcggatcgaccgcggccgcgccgattgcc
cgcgacatcatgctgttcgcgctggcgggtggtctgccgcccttggatgcggtcccatcg
ggcgagcgtgccgcgatggaggaacgccacaacgccatgcatctttatacgcccacgccg
ccgcaacccggccgcagccgggcctga
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