Pseudomonas hormoni: KJF94_00465
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Entry
KJF94_00465 CDS
T09556
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phom03016
]
KJF94_00465 (truB)
Enzymes [BR:
phom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KJF94_00465 (truB)
Transfer RNA biogenesis [BR:
phom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KJF94_00465 (truB)
Prokaryotic type
KJF94_00465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QVW24092
UniProt:
A0ABX8EWG4
LinkDB
All DBs
Position
107654..108571
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRSDVEAALPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSSFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaaaccg
ctggggttcacctccaacgcggcgttgcagaaggtccgctggttgctcaacgccgagaag
gccggtcacaccggcagtctcgatccgctggccaccggcgtattgccgttgtgcttcggt
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaaaaccaccaccacggcggatgccgaaggtgaagttttgcaggaacgcccg
gtgaccgttggtcgatccgatgtcgaagcggcactgccgaaatttcgtgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctgtacaagctggca
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgaaggtgatactgcgcggctggcggtggattgcagcaaaggcacctatatc
cgcaccctggtggaggatattggtgagcaactcggttgtggcgcttacgttgctgaattg
cgacgtacccaggccgggcctttcaccctggcgcagacggtcacgcttgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggcttgctggattggccactgctgcagttctcggagcacagctcgttctactggctcaac
ggccagccggtacgagccccggatgcaccgaagttcggcatggtacgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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