KEGG   Pseudomonas hormoni: KJF94_01090
Entry
KJF94_01090       CDS       T09556                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
phom  Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:phom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phom03019]
    KJF94_01090 (rapZ)
Messenger RNA biogenesis [BR:phom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     KJF94_01090 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_33 AAA_29 AAA_28 AAA_16 CoaE AAA_22 SKI
Other DBs
NCBI-ProteinID: QVW24207
LinkDB
Position
complement(253517..254374)
AA seq 285 aa
MRLIIVSGRSGSGKSTALDVLEDNGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLTRFPELLAEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSSANRSLAEA
INDETSLLGPIADLADLKVNTTNLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDQSGLDLPVAEYLAAQPDVEEMFQDISTYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQALQKSLKNVQVRHRDLS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgcttgatcatcgtcagtggccgttccggctcaggtaaaagtaccgcactcgatgtt
ctcgaggacaacggctattactgcatcgacaacctgcccgccgggttgctgccggaactg
gccgaacgtgcgttgattcatactgagctcgcgcagccgctggttgccgtctccatcgac
gcacgcaacttgccgagtcacctgacccgttttccggaactgctcgcagaagtccgcagc
cggcatatccagtgcgatgtcctgtatctggatgccgacgaagaaaccttgctcaagcgc
ttttcggaaacccgccgtcgtcacccgctaagcagcgccaatcgctcgctggccgaggcg
atcaacgatgaaaccagcctgctcgggccaattgccgacctcgccgatctcaaggtcaac
accacgaacctgaacctgtatcagctgcgcgataccatcaagttgcgcctgctgaaccag
cccgaacccggcactgcgttcctggtggagtcttttggattcaagcgcggcatgccagtg
gacgccgatctggtgttcgacgtgcgctgcctgccgaacccctattggaagccggagcta
cgcgatcagtccgggcttgatctaccggttgccgagtacctggcggcccagccggacgtc
gaggagatgttccaggacatctccacgtacctgctcaaatggctgccccgctttgccgcc
agcaaccgtgcttatgtcaccattgccattggctgcacaggcgggcatcaccgctccgtc
tacctgaccgaacgtctgggtcaggccctgcaaaaatccctgaagaacgtccaggtccgc
caccgcgacctcagctaa

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