Pseudomonas hormoni: KJF94_02635
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Entry
KJF94_02635 CDS
T09556
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phom
Pseudomonas hormoni
Pathway
phom03030
DNA replication
phom03430
Mismatch repair
phom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJF94_02635 (dnaE)
03430 Mismatch repair
KJF94_02635 (dnaE)
03440 Homologous recombination
KJF94_02635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phom03032
]
KJF94_02635 (dnaE)
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_02635 (dnaE)
Enzymes [BR:
phom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJF94_02635 (dnaE)
DNA replication proteins [BR:
phom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJF94_02635 (dnaE)
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJF94_02635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QVW24498
UniProt:
A0ABX8F0Z5
LinkDB
All DBs
Position
586051..589572
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKAAMGAG
IKPICGADLWLSNKDPDNALSRISLLAMNAVGYRNLTELISRGFIDGQRNGSVIIEREWV
AEASEGLIMLSAAKEGEIGLAMLSGNPAEAEKLAREWMAVFPDRFYLEIQRTNRPNDEEQ
LHGAVALAEKIGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SADEMAELFSDIPEALENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYETKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTVIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYT
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCASNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEIRTMKLRLDAPDVNTSEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQASIDQNRAVLLNAMEGAIKAAEQTARTHDSGHADLFGGLFVEEDADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTKDLKGDQLRWLGELFKRHRGACPITMEYTSPDAKAL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatattccctggtcgacggtctg
gtgcggatcaagccgctggtcaagaccctggtcggcatgaacatgcctgccgtagcggtc
accgaccagaacaacatgtgttccctggtcaaattctataaagccgccatgggcgcaggc
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaggatccggacaacgccctg
agccggatcagcctgctggcaatgaacgctgtcggctatcgcaaccttactgagctgatc
tcccgcggcttcatcgacggccagcgcaatggttcggtcatcatcgagcgcgagtgggtg
gccgaagccagcgaaggcttgatcatgctgtcggcggcgaaagaaggcgagattggcctg
gccatgctcagcggcaatccggctgaagcggaaaagctggcgcgtgaatggatggcggtg
ttcccggatcgtttctatctggagatccagcgcaccaatcgccccaacgatgaagaacaa
ttgcacggcgccgtggccctggccgagaaaatcggcgcgccactggtcgcgaccaacgat
gtgcgcttcatcaagcaggaagatttcgccgctcacgagacccgcgtctgcatcggtgag
ggccgcgccctcgacgatccgcggcgttcgaagaattacagcgatcagcaatacctcaaa
agcgccgatgaaatggccgagctgttcagcgacattcccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacattgaagtgaagctgggcacgcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgacgaatatttccgcaaggtgtccttcgatggtctg
gaagagcgcctcagcgttctgctgcccaaggacaccaccgaagactatgaaaccaagcgt
caggtctacgtcgaccggctgaatttcgagctggatatcattatccagatgggcttcccg
ggttacttcctgatcgttatggactttatccagtgggccaagagcaacggcgtgccggta
ggccctggccgtggttcgggtgccggctcgctggtggcctatgtgcagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgaacgtttccttaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggacggtcgtgaccgggtcatcgactacgtg
gccgaaaagtacggccgcaacgcggtcagccagatcatcaccttcggttccatggccgcc
aaggctgtggtccgtgacgtggcgcgggtgcagggcaagtcctacgggttggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctccgtgacttcatcaaggtcgatgaagaagccgccgaaatctgggaaatggcg
cgcaagctggaaggcgttgtgcgtaacgtcggcaagcacgccggtggtgtggtgatcgcg
ccgaccaagctgactgacttttcgccgatctattgcgacgaggccggtgatggcctggta
acccagttcgacaaggacgacgttgaagccgccggcctggtgaagttcgacttcctgggg
ctgcggaccctgacggtcatcgactgggcgttgaaaaccatcaaccgcgatcgcgcaaag
gtcaacgagccaccgctggacattgcgttcatcccgctggacgacaagcccacctacacg
ctgctgcaaaaagctgaaaccaccgcggtgttccagctcgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccgggccctttgcaatccggcatggttgacgactttatcaaccgtaagcacggtcgc
gccgaactcgcgtacccgcactcggactaccagtacgaaggtctgaaaccggtactggca
ccgacttacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
ggctacacccttggcggcgcggacatgctgcgtcgagccatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggtggtttcattgaaggttgcgcctccaacaacatcgatgcc
gacctggccggtaacattttcgacctggtggaaaaattcgccggttacggcttcaacaaa
tcccactccgccgcttacggcctggtgtcgtaccagaccgcgtggctgaaaacgcactac
ccggcgccattcatggccgcggtactgtccgcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaaattcgcaccatgaagctgcgtctcgacgcgccggatgtgaatacc
tcggagttcaagttcacggtgaacgacgaaggccgcatcatctacggccttggcgcgatc
aagggtgtgggcgaaggaccggtggaagcgatcaccgaggcgcgtcaggatgggccgttc
aaggacctgttcgatttctgcgcccgggtcgatctcaaacggatcaacaagcgcacgctg
gacggtttgatccgtagcggtgcgctggatcgtctggggccgtatttccatgacgaaccg
aaagcctatcaagcgagcatcgaccagaaccgcgcggtcttgctgaatgcgatggaaggg
gcgatcaaggccgccgaacaaaccgctcgtacgcacgacagtggccacgccgacctgttc
ggcggtctgtttgtagaagaagacgccgacgtctacgccaatcaccgcaaagcgaaagag
ctgaccctgaaggaacgcctgaaaggggagaaagacaccctgggcctgtacctgaccggt
cacccgatcgacgaatacgaaggtgaaatccgccgttttgcccgtcagcggatcatcgac
ctgaagccggctcgtgatacacagaccgtcgcaggcatgatcatcgccttgcgggttatg
aagaacaaaaagggcgacaagatgggcttcatcacccttgacgaccgttctggccggatc
gaagcttcgttgttcgctgatgcgttccattcggcgcagtcgctgttgcagacggacgcc
atggtggtggtcgaaggcgaggtgagcaacgacgacttctccggcggtttgcgcctgcgg
gtcaagcgggtgatgagcatggaagatgcgcgcaccaacctggccgagagcctgcgattg
aagctgcagaccaaggatttgaaaggtgatcagctacgctggctgggtgagttgttcaag
cgtcaccgcggtgcgtgcccgatcaccatggaatacacgagccccgatgcgaaggccttg
ctgcagttcggcgagacctggcgaatcgacccggcggatgcgttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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