Pseudomonas hormoni: KJF94_02695
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Entry
KJF94_02695 CDS
T09556
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phom03016
]
KJF94_02695 (truD)
Enzymes [BR:
phom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KJF94_02695 (truD)
Transfer RNA biogenesis [BR:
phom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KJF94_02695 (truD)
Prokaryotic type
KJF94_02695 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QVW24510
LinkDB
All DBs
Position
601105..602163
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGEALGTAVLKATAEDFQVDEVLNIPLSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTGRHKR
KLQRGAHSANGFTLRLTQFAGDKAAIEARLQLIAKQGIPNYFGAQRFGFDGGNVVDARGW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPATGAVHELEQAIAAREADLRDWLINAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaattgctcggcccgcgtgcctacggtgaagccctcggcaccgcagtg
ttgaaagcgacggcggaagacttccaggtcgacgaagtgctcaacatcccgctcagtggc
gatggcgaacacctgtggatctgggtggaaaagcgcggcctgaataccgaagaagcggca
cgccggattgccaaggcagcgggcgtgccattgcgcaccgtcagttacgccggcctcaag
gatcgtcaggcgctgacgcgccaatggttcagcgtgcaactgccgggcaaggctgatcct
gatttgtcggcggcggaaaacgatacgctgaaaatcctcaagaccggtcggcacaagcgc
aagctgcaacgcggtgcccattcggccaacggtttcaccttgcgcctgacccaattcgcg
ggcgacaaagcggctatcgaagcgcgcctgcaactgatcgccaaacaaggtattcccaat
tatttcggcgcccaacggttcggctttgacggcggcaacgtggtcgatgctcgtggctgg
gccgcgcgcaaggccttgccggaacagcgcaacgttcgttcgcggttgctctccaccgcg
cgcagttttctgttcaaccaggtgttggcggcgcgtgtggcggatggcacctggcagcag
gcgcaggtcggtgatctgctggcgttcaccgacagccgaagcttctttccggccggtgag
gccgagtgcagcgacccgcgactggcgattctcgacctgcacccgaccggcccgcagtgg
ggcgaaggtgactcgccggcgacgggcgctgtccatgaactggagcaggcaatcgccgcg
cgcgaagcggatctgcgcgattggttgattaacgccggtatgagccacgaacgtcgcatc
ctgcgactgcccattggtgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtattggtgcgtgaactcgtcgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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